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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0194100-01 Rice mitochondrion 55.29 9.96
Os11t0538900-01 Rice mitochondrion 55.29 9.51
Os02t0232400-01 Rice nucleus, plastid 30.59 5.2
Protein Annotations
EnsemblPlants:Os11t0623601-00EnsemblPlantsGene:Os11g0623601Gene3D:1.10.230.10Gene3D:1.10.580.10GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0046912InterPro:Citrate_synth-like_lrg_a-subInterPro:Citrate_synth-like_sm_a-subInterPro:Citrate_synthaseInterPro:Citrate_synthase_sf
InterPro:IPR016142InterPro:IPR016143PANTHER:PTHR11739PANTHER:PTHR11739:SF8PFAM:PF00285ProteinID:BAT14917.1
SUPFAM:SSF48256TMHMM:TMhelixUniParc:UPI000393C23AUniProt:A0A0P0Y4G2MapMan:35.1:
Description
Citrate synthase-like domain containing protein. (Os11t0623601-00)
Coordinates
chr11:-:24375028..24377233
Molecular Weight (calculated)
9389.4 Da
IEP (calculated)
5.560
GRAVY (calculated)
0.246
Length
85 amino acids
Sequence
(BLAST)
1: MNAEMSVLIV HLVGSALGGP YLSLVAALNG FAGPLHGMSN QEVLLWIKPI TGQIGSDIRT DLLKECVENT KQWKDCSWLW SWSYV
Best Arabidopsis Sequence Match ( AT2G44350.3 )
(BLAST)
001: MVFFRSVSAF TRLRSRVQGQ QSSLSNSVRW IQMQSSTDLD LKSQLQELIP EQQDRLKKLK SEHGKVQLGN ITVDMVIGGM RGMTGLLWET SLLDPEEGIR
101: FRGLSIPECQ KVLPTAQSGA EPLPEGLLWL LLTGKVPSKE QVEALSKDLA NRAAVPDYVY NAIDALPSTA HPMTQFASGV MALQVQSEFQ KAYENGIHKS
201: KFWEPTYEDC LNLIARVPVV AAYVYRRMYK NGDSIPSDKS LDYGANFSHM LGFDDEKVKE LMRLYITIHS DHEGGNVSAH TGHLVGSALS DPYLSFAAAL
301: NGLAGPLHGL ANQEVLLWIK SVVEECGEDI SKEQLKEYVW KTLNSGKVIP GYGHGVLRNT DPRYVCQREF ALKHLPDDPL FQLVSKLYEV VPPVLTELGK
401: VKNPWPNVDA HSGVLLNHYG LTEARYYTVL FGVSRSLGIC SQLIWDRALG LALERPKSVT MDWLEAHCKK ASSA
Arabidopsis Description
CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.