Factsheet for PGSC0003DMT400003548

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g087430.2.1	Tomato	mitochondrion, nucleus	96.21	94.53
VIT_14s0066g02270.t01	Wine grape	cytosol	68.37	63.43
KRH18550	Soybean	cytosol	65.03	63.07
KRG93446	Soybean	cytosol	65.03	62.53
PGSC0003DMT400058661	Potato	plastid	26.28	46.27
PGSC0003DMT400069298	Potato	cytosol	32.96	45.26
PGSC0003DMT400061482	Potato	nucleus	38.53	37.2
PGSC0003DMT400053156	Potato	mitochondrion	36.08	34.91
PGSC0003DMT400049726	Potato	nucleus	41.87	33.57
PGSC0003DMT400042059	Potato	nucleus	41.43	31.21
PGSC0003DMT400082071	Potato	nucleus	41.87	30.13
PGSC0003DMT400062236	Potato	mitochondrion	40.76	29.05
PGSC0003DMT400052816	Potato	mitochondrion	39.42	28.59
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	40.09	26.99

Protein Annotations

EntrezGene:102600523	MapMan:27.5.4.1	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:M0ZLW4	PFAM:PF03372	EnsemblPlantsGene:PGSC0003DMG401001401
PGSC:PGSC0003DMG401001401	EnsemblPlants:PGSC0003DMT400003548	PANTHER:PTHR11200	PANTHER:PTHR11200:SF168	SMART:SM00128	SUPFAM:SSF56219
UniParc:UPI000294DB5B	RefSeq:XP_006338499.1	RefSeq:XP_015162609.1	SEG:seg	:	:

Description

Inositol-1,4,5-triphosphate-5-phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG401001401]

Coordinates

chr2:+:46598275..46601814

Molecular Weight (calculated)

50703.1 Da

IEP (calculated)

8.763

GRAVY (calculated)

-0.497

Length

449 amino acids

Sequence
(BLAST)

001: MGNKERKSRR KVFRLWFSKR RSRADASHLS EISDDDGQDD ECMNGLSVRS LDRGPCILNN ELRIFVGTWN VAGRSPVGSL AVDLDEWLNL KEAADIYVLG
101: FQEIVPLKPK TVIGAEDPTE ATNWNVLIGK TLNSKYGGAW LTPMVNPITN DDYRYYQAAE SDTRLRSDYE IVSARGQSRT EYKISDCVGS YKLMASKKMV
201: GVFISVWMRR TLLKKYCVSE VKVSSVACGI MGYLGNKGSV SVSMSIGGTS FCFVAAHLAS GEKKGDEGKR NRQVTEIFRR TSFPRPSEDC HKNHPLTILG
301: HDQIFWFGDL NYRLYLEDNL ARELIKKKNW SALQEFDQLG KELEDGGVFQ GWQEGDIEFA PTYKYSSSNC NRYSGGLPSR AGEKQRTPAW CDRILWHGKG
401: VKQLSYFRSE SKFSDHRPVS ALFSVLVEDQ KCAHSSLVPF PPFSPLHNS

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.