Factsheet for PGSC0003DMT400061482

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g005690.2.1	Tomato	cytosol	85.38	93.85
Bra005195.1-P	Field mustard	nucleus	50.97	58.23
KRH32331	Soybean	mitochondrion	57.2	57.45
KRG95832	Soybean	nucleus	57.2	56.6
AT2G37440.1	Thale cress	mitochondrion	58.06	56.37
KRH19738	Soybean	nucleus	56.56	56.32
CDX91363	Canola	mitochondrion	57.42	55.86
VIT_08s0040g02520.t01	Wine grape	cytosol	57.42	55.17
KRH67562	Soybean	nucleus	57.85	54.56
CDX74960	Canola	mitochondrion	58.49	54.51
CDX79733	Canola	nucleus	51.18	54.09
CDY18445	Canola	mitochondrion	57.63	54.03
Bra017187.1-P	Field mustard	mitochondrion	56.99	53.54
CDX93379	Canola	mitochondrion	56.77	53.23
CDY07789	Canola	mitochondrion	52.47	52.81
Bra000001.1-P	Field mustard	mitochondrion	56.99	52.58
Os05t0114100-00	Rice	cytosol, nucleus	45.16	48.39
PGSC0003DMT400058661	Potato	plastid	26.24	47.84
GSMUA_Achr5P28560_001	Banana	nucleus	55.05	46.89
PGSC0003DMT400069298	Potato	cytosol	32.04	45.57
EES18903	Sorghum	nucleus	50.75	43.46
GSMUA_Achr8P02080_001	Banana	mitochondrion	52.04	42.83
PGSC0003DMT400049726	Potato	nucleus	50.97	42.32
TraesCSU01G006000.2	Wheat	plastid	50.54	40.94
PGSC0003DMT400053156	Potato	mitochondrion	40.65	40.73
Zm00001d035612_P001	Maize	mitochondrion	45.38	40.19
TraesCS1A01G039300.1	Wheat	plastid	51.18	40.07
GSMUA_Achr6P15360_001	Banana	nucleus	51.4	39.83
TraesCS1B01G052100.1	Wheat	plastid	50.54	39.83
Zm00001d035614_P001	Maize	mitochondrion	44.3	39.39
PGSC0003DMT400003548	Potato	nucleus	37.2	38.53
PGSC0003DMT400042059	Potato	nucleus	48.82	38.09
PGSC0003DMT400082071	Potato	nucleus	49.68	37.02
PGSC0003DMT400052816	Potato	mitochondrion	38.92	29.24
PGSC0003DMT400062236	Potato	mitochondrion	39.57	29.21
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	38.71	26.99

Protein Annotations

EntrezGene:102587898	MapMan:27.5.4.1	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:M1C7J9	PFAM:PF03372	EnsemblPlantsGene:PGSC0003DMG400023923
PGSC:PGSC0003DMG400023923	EnsemblPlants:PGSC0003DMT400061482	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	SMART:SM00128	SUPFAM:SSF56219
UniParc:UPI0002964CC0	RefSeq:XP_006345659.1	SEG:seg	:	:	:

Description

Endonuclease/exonuclease/phosphatase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023923]

Coordinates

chr9:+:7579017..7585740

Molecular Weight (calculated)

53111.6 Da

IEP (calculated)

7.370

GRAVY (calculated)

-0.647

Length

465 amino acids

Sequence
(BLAST)

001: MKTEQKLSKS SWTKVVVRKW LNMRSKSEEF HSDHIIDVMG GRGERRRKSC SDDGSCAVVP EELSESWLME RNGGIEEPIL EKETSTHQNL RMFVGTWNVG
101: GKSPHEELDL ADWLNSSAPA DIYVLGFQEI VPLNAGNVLG PEDSGPASKW LSLIRQTLNN DTNTPDLSPN YNNTPNSEPP SLDDLYHQQS SLKPRVSFSD
201: WERLNHDVSP SPNCLSNRYY YNSSSQGQNS NYCLAASKQM VGLFLCIWTR KDLYQHITNL KVSCVGTGIM GYLGNKGSIS ISMTLHHKTF CFVCTHLASG
301: EKEGDEIKRN SHVMEILKKT RFSDIGKSHI LDHDKIIWLG DLNYRLASGC EDTYELVKNS DWETLLEKDQ LRIEQRAGRI FNGWKEGRIY FAPTYKYLYN
401: SDHYVAHTCT SKEKTRTPAW CDRILWKGEG LKQICYVRGE SKFSDHRPVY SLFSVNNNIT QKLPQ

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.