Factsheet for VIT_08s0040g02520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005195.1-P	Field mustard	nucleus	52.48	62.41
KRG95832	Soybean	nucleus	59.09	60.85
KRH67562	Soybean	nucleus	60.95	59.84
Solyc09g005690.2.1	Tomato	cytosol	51.86	59.34
CDX79733	Canola	nucleus	53.51	58.86
KRH32331	Soybean	mitochondrion	55.17	57.67
PGSC0003DMT400061482	Potato	nucleus	55.17	57.42
KRH19738	Soybean	nucleus	54.96	56.96
CDX91363	Canola	mitochondrion	56.2	56.9
AT2G37440.1	Thale cress	mitochondrion	55.37	55.95
CDX74960	Canola	mitochondrion	56.41	54.71
CDX93379	Canola	mitochondrion	55.58	54.23
CDY18445	Canola	mitochondrion	55.37	54.03
CDY07789	Canola	mitochondrion	51.45	53.9
Bra000001.1-P	Field mustard	mitochondrion	55.99	53.77
Bra017187.1-P	Field mustard	mitochondrion	54.96	53.74
Os05t0114100-00	Rice	cytosol, nucleus	47.93	53.46
GSMUA_Achr5P28560_001	Banana	nucleus	54.34	48.17
VIT_13s0073g00680.t01	Wine grape	cytosol	39.67	44.55
GSMUA_Achr8P02080_001	Banana	mitochondrion	50.0	42.83
TraesCSU01G006000.2	Wheat	plastid	50.62	42.68
EES18903	Sorghum	nucleus	47.31	42.17
TraesCS1A01G039300.1	Wheat	plastid	51.03	41.58
TraesCS1B01G052100.1	Wheat	plastid	50.62	41.53
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	37.81	41.12
VIT_07s0151g00590.t01	Wine grape	nucleus	47.11	40.86
Zm00001d035612_P001	Maize	mitochondrion	43.8	40.38
GSMUA_Achr6P15360_001	Banana	nucleus	49.79	40.17
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	46.9	40.04
Zm00001d035614_P001	Maize	mitochondrion	43.18	39.96
VIT_01s0011g06310.t01	Wine grape	mitochondrion	35.54	39.18
VIT_00s0357g00110.t01	Wine grape	golgi	36.36	37.77
VIT_14s0066g02270.t01	Wine grape	cytosol	36.36	36.36
VIT_02s0012g00550.t01	Wine grape	mitochondrion	40.5	31.21
VIT_18s0157g00210.t01	Wine grape	plastid	38.43	26.23

Protein Annotations

EntrezGene:100256751	wikigene:100256751	MapMan:27.5.4.1	Gene3D:3.60.10.10	ProteinID:CCB57035	ProteinID:CCB57035.1
InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	UniProt:F6HQY6	EMBL:FN596008	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856
InterPro:IPPc	InterPro:IPR036691	EntrezGene:LOC100256751	wikigene:LOC100256751	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF115	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002108859	ArrayExpress:VIT_08s0040g02520	EnsemblPlantsGene:VIT_08s0040g02520
EnsemblPlants:VIT_08s0040g02520.t01	unigene:Vvi.22033	RefSeq:XP_002274849	RefSeq:XP_002274849.2	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:13562848..13567856

Molecular Weight (calculated)

54783.2 Da

IEP (calculated)

8.718

GRAVY (calculated)

-0.535

Length

484 amino acids

Sequence
(BLAST)

001: MANRCERRKS CSDGDYCVIV PDQVSGWLTE GRNGFKRPRA QELQSAVTNE SINLRMLVGT WNVGGKTPHE GLNIRDWFTT QAPADIYVLG FQEIVPLNAG
101: NVLGAEDSGP SAKWLSLIRR ALNLNRKEHE LPQYYEDATN PDKPRVSFSD LLSLEDELER EDSQTFLNQN PNSNSNGSPN GMPHRYCLAA SKQMVGIFLC
201: VWVRADLQRH ISNLRVSCVG RGIMGYLGNK GSISISMTLH QTTFCFVCTH LTSGEKQGDE VRRNSDVTEI LRKTRFSPTC SCPGQPLPPD SILEHDKIIW
301: LGDLNYRLAS GCGDVYELLK RNNWQALLEK DQLKIEQRSG RVFKGWEEGR IYFAPTYKYL ANSDHYVVHT SKSKEKRRTP AWCDRILWKG EGLKQMWYLR
401: GESRFSDHRP VYAMFSVQVD VVNKSKPMRS CISKPTTVTC VAKVQAEELL LLPRAQSFRE TSGSELTSHI LSGKQPTNAR ITAQ

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.