Factsheet for VIT_02s0012g00550.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37570	Soybean	cytosol	13.54	75.89
KRG89576	Soybean	cytosol	13.38	75.0
PGSC0003DMT400052816	Potato	mitochondrion	66.56	67.53
KRH77232	Soybean	cytosol	61.31	67.31
KRH28263	Soybean	cytosol	67.36	67.14
KRH57586	Soybean	nucleus	66.56	66.99
KRH04304	Soybean	cytosol, mitochondrion, nucleus	66.72	66.61
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	65.29	66.24
GSMUA_Achr9P23430_001	Banana	mitochondrion	49.36	65.96
Solyc08g077210.2.1	Tomato	mitochondrion	64.97	64.76
PGSC0003DMT400062236	Potato	mitochondrion	64.33	64.13
GSMUA_Achr3P27520_001	Banana	mitochondrion	49.84	62.23
CDX78819	Canola	nucleus	34.71	60.56
CDY44496	Canola	nucleus	57.64	57.92
CDX90428	Canola	nucleus	58.12	57.03
Bra012624.1-P	Field mustard	nucleus	55.89	56.34
Bra013275.1-P	Field mustard	nucleus	56.05	56.14
AT4G18010.1	Thale cress	nucleus	57.48	55.88
CDY68359	Canola	nucleus	45.86	54.34
VIT_07s0151g00590.t01	Wine grape	nucleus	36.31	40.86
VIT_08s0040g02520.t01	Wine grape	cytosol	31.21	40.5
Zm00001d019672_P002	Maize	cytosol	31.21	39.28
VIT_14s0066g02270.t01	Wine grape	cytosol	30.25	39.26
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	35.19	38.98
VIT_01s0011g06310.t01	Wine grape	mitochondrion	27.07	38.72
VIT_18s0157g00210.t01	Wine grape	plastid	43.15	38.22
VIT_13s0073g00680.t01	Wine grape	cytosol	25.96	37.82
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	25.8	36.4
VIT_00s0357g00110.t01	Wine grape	golgi	23.73	31.97

Protein Annotations

EntrezGene:100267737	wikigene:100267737	MapMan:27.5.4.1	Gene3D:3.60.10.10	ProteinID:CBI33949	ProteinID:CBI33949.3
UniProt:D7TTG9	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	EMBL:FN596247	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856
InterPro:IPPc	InterPro:IPR036691	EntrezGene:LOC100267737	wikigene:LOC100267737	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF107	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0001BE4544	ArrayExpress:VIT_02s0012g00550	EnsemblPlantsGene:VIT_02s0012g00550
EnsemblPlants:VIT_02s0012g00550.t01	RefSeq:XP_002279188	RefSeq:XP_002279188.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:6406912..6414734

Molecular Weight (calculated)

72216.7 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.686

Length

628 amino acids

Sequence
(BLAST)

001: MRTRQGKRSE AFWPSIVMKK WLNIKPKAYD FSEDEVDTET ESEDDACSLK DARVQMGEDH ACRMQRNQSV CTNQTSESKG YSSSHRRGKS ETLRVHYINR
101: KDIRLTIGTW NVAGRLPNED LEIEEWLCMQ EPADIYILGF QEVVPLNAGN VLGAEDSQPI PKWEAIIRRT LNKSFEPESE YKSYSAPTSP VLRASCVADA
201: LKEEVDSPTL EMMNNETAAP TNGCNLERHK LNGMIGTGKK FQLRRLYGGD SDIRLDWPEY SLDKVPQVLS NLKLRRVLSS SARVGFGWME TPINFSPQKV
301: TLDGGGMKRS YRSSGNLGLI FMEQQERSKL CDYLSDVSDR SSEEEDESLI EIPEHQFKDG ENKDCMKSRQ SYVRIVSKQM VGIYISVWVR KRLRRHINNL
401: KVSPVGVGLM GYMGNKGSVS VSMSVFQTRI CFVCSHLTSG HKDGDKQRRN SDVYEILRRT QFSSVIDADQ PETIPSHDQI FWFGDLNYRL NMLDAEIRKL
501: VARKKWDELI NSDQLSKELR SGHVFEGWKE GVIDFPPTYK YEINSDRYVG ENPKEGEKKR SPAWCDRILW LGKGIKQLCY NRAEIRVSDH RPVSSNFMVE
601: VEVFDHRKLQ RALKPTDARV HPEIFLDE

Best Arabidopsis Sequence Match ( AT4G18010.1 )
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNRKPKVYD FSEDEIDTEP ESEDDVCSVK DVPNVHCVTD EDSHNGRRGS EADHGNNISD GGVSVRGGYQ RKHRRGKSET
101: LRAQYINTKD IKVTVATWNV AGKRPSDDLE IEDWLSTDNP SDIYIIGFQE VVPLNAGNVF GAEDRGPIPK WESIIRRTLN KSNKESVYDQ SPSCNNNALH
201: RSHSAPSSPI LAQEANSIIS HVMVENLVAD HSLDLATNEF IDAATALPSL EPQRNPNMDW PELALDSNPQ IVGSEGKLRR VFSSNATLGF KLPENPSGAS
301: RFASEARQLK RSRSFETLNL SWNDIKEEID NRSSSSSEAE EAAKIMHDDS SDGDSSSQDE EDGDKIRNSY GLPEDLVEEC RKVKDSQKYV RIVSKQMVGI
401: YVSVWIRRRL RRHVNNLKVS PVGVGLMGYM GNKGSVSISM TLYQSRMCFV CSHLTSGHKD GAEQRRNADV YEIIRRTRFA SVLDTDQPRT IPCHDQVFWF
501: GDLNYRLNMS DGEVRKLVSQ KRWDELKNSD QLIRELRRGH VFDGWREGPI KFPPTYKYEF DSDRYAGENL REPEKKRAPA WCDRILWLGK GIRQECYKRS
601: EIRMSDHRPV TSIFNVGVEV FDHRKLQRAL HVNNAAASAV HPEPSF

Arabidopsis Description

IP5P2Type I inositol polyphosphate 5-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.