Factsheet for VIT_00s0357g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 6
golgi 7
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	77.9	81.57
PGSC0003DMT400053156	Potato	mitochondrion	55.36	55.6
CDY33984	Canola	nucleus	56.22	55.39
Bra031881.1-P	Field mustard	cytosol	55.15	55.27
KRH43218	Soybean	nucleus	63.52	50.77
AT5G65090.1	Thale cress	nucleus	57.51	50.66
KRH59383	Soybean	nucleus	63.3	50.6
GSMUA_Achr9P12980_001	Banana	nucleus	53.22	49.21
VIT_13s0073g00680.t01	Wine grape	cytosol	45.06	48.72
GSMUA_Achr5P16700_001	Banana	cytosol	43.78	48.57
CDY31285	Canola	nucleus	56.65	47.83
Solyc04g054830.2.1	Tomato	nucleus	56.65	47.31
Os02t0751900-01	Rice	plasma membrane	57.08	47.0
CDY14538	Canola	nucleus	57.94	46.55
CDY08822	Canola	nucleus	57.73	46.46
GSMUA_Achr7P17700_001	Banana	nucleus	50.0	45.87
Bra024353.1-P	Field mustard	nucleus	57.94	45.61
TraesCS7A01G181500.1	Wheat	nucleus, plastid	48.28	45.45
KXG19625	Sorghum	nucleus	49.79	45.4
Os06t0222900-01	Rice	nucleus	51.5	45.03
Zm00001d052232_P002	Maize	nucleus	51.07	44.82
TraesCS7B01G086400.2	Wheat	nucleus, plastid	49.36	43.89
Zm00001d044859_P001	Maize	nucleus	48.93	43.85
TraesCS7D01G183100.1	Wheat	nucleus, plastid	48.93	43.85
TraesCS6A01G302300.1	Wheat	nucleus, plastid	55.15	43.05
TraesCS6B01G331500.1	Wheat	nucleus, plastid	55.15	42.83
TraesCS6D01G281800.1	Wheat	nucleus, plastid	55.15	42.76
KXG30738	Sorghum	nucleus	52.36	42.21
HORVU6Hr1G075060.26	Barley	nucleus	55.15	42.2
Zm00001d018078_P002	Maize	nucleus	51.72	41.62
Zm00001d052401_P001	Maize	cytosol, nucleus, plastid	39.91	39.74
HORVU4Hr1G023500.2	Barley	nucleus, plastid	46.57	38.96
KXG27642	Sorghum	plastid	47.21	38.8
TraesCS4D01G123400.1	Wheat	plastid	46.57	38.75
TraesCS4A01G189600.1	Wheat	plastid	46.57	38.75
TraesCS4B01G129000.1	Wheat	nucleus, plastid	46.78	37.91
VIT_08s0040g02520.t01	Wine grape	cytosol	37.77	36.36
VIT_07s0151g00590.t01	Wine grape	nucleus	42.49	35.48
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	42.27	34.74
VIT_01s0011g06310.t01	Wine grape	mitochondrion	31.76	33.71
VIT_14s0066g02270.t01	Wine grape	cytosol	29.18	28.1
VIT_02s0012g00550.t01	Wine grape	mitochondrion	31.97	23.73
VIT_18s0157g00210.t01	Wine grape	plastid	33.69	22.14

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	ProteinID:CCB57275	ProteinID:CCB57275.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
UniProt:F6HRG7	EMBL:FN596015	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF106
SMART:SM00128	SUPFAM:SSF56219	TMHMM:TMhelix	UniParc:UPI0002109135	ArrayExpress:VIT_00s0357g00110	EnsemblPlantsGene:VIT_00s0357g00110
EnsemblPlants:VIT_00s0357g00110.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:25346801..25349936

Molecular Weight (calculated)

52742.1 Da

IEP (calculated)

7.847

GRAVY (calculated)

-0.250

Length

466 amino acids

Sequence
(BLAST)

001: MPYIAILGFV LIILFLFSLW LTDLERKIIS SRRKPFKETS HVIRKIFSER ETSPGIEGLN LSNFDSPMAP PTEFQDVRVF VATWNVGGKT PNAGLNLEDF
101: LQMEGSADIY VLGFQEIVPL SAGNVLVIED NEPAAKWLAL ICQALNSPQY DPDTTDGSRL SNYSKDSKTQ GGSHHFFQKP SLKVLSRNFR ADTRLLKTCN
201: CPLETRASDR RRPKKLRERI NKFDSASADD FLSAADIPSY PSSPCSTGYS LITSKQMVGI FLSVWARDEL VQHIGHLRVS CIGRGIMGCL GNKGCISVSM
301: SLHQTTFCFV CSHLASGEKE GDELKRNADV AEILKNTQFP KICKNIIRPI PERIVDHDRI IWLGDLNYRV ALSYEETIIL LEDNDWDSLL LKDQLIVERL
401: AGRVFTGWNE GRIFFAPTYK YSHNSDSYAG ETIRSKSTRF RKGYSCAATR IEYLDCIPQR HSFYEF

Best Arabidopsis Sequence Match ( AT5G65090.1 )
(BLAST)

001: MNNRGNNDDL DHHYGVFNDF ERRMTSRKKS VLDNTSPMIW KTVSERKSSP GIEGLNLSSF DRPMAPTTEI RELRVFLATW NVGGRTPNND LNLEDFLLVE
101: GTADLYICGF QEIVPLSAGN VLVVEDNEPA AKWLALISQA LNKPKQESVY SNAAYSASRT TTCSSSSCGS EESRAPSSLS FFQRPNLKVL SRNYRVDSSL
201: LKTCNCPVID TSVGWEARRS KRFSDPSTDS SNNVEPENFR VHENFLFDDV PATTKMPGQM SYRLIASKQM VGLFLSVWAR RELIPHISHL RLDSVGRGIM
301: GRLGNKGCIA ISMSLHQTSF CFVCSHLASG EKEGDELRRN ADVAEILKHT QFPKLTKNPN CHAPERIIDH DRVLWLGDLN YRVALTYEET RVLLEDNDWD
401: TLLERDQLNM ERGAGRVFSG FQEGQIFFAP TYKYSQNSDA YAGEMTKSKK KRRTPAWCDR ILWKGEGIEQ LSYIRGESRF SDHRPVCAIF AVEVDVKSLN
501: KGRFRKGYSC AAVRLVEDVA IPQRHSFYD

Arabidopsis Description

IP5P5Type I inositol polyphosphate 5-phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.