Factsheet for VIT_18s0157g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53817	Canola	nucleus	32.3	70.25
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	59.1	66.4
CDY53820	Canola	mitochondrion	27.22	66.32
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	58.39	65.61
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	57.83	64.16
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	57.55	63.65
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	44.99	61.35
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	56.7	60.27
GSMUA_AchrUn_...	Banana	nucleus	48.8	59.66
CDX68304	Canola	cytosol, nucleus, plastid	51.62	57.55
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	52.61	56.34
AT1G71710.1	Thale cress	cytosol, nucleus, plastid	52.75	56.33
CDY37949	Canola	cytosol, nucleus, plastid	48.94	56.15
CDX72820	Canola	cytosol, nucleus, plastid	49.65	55.26
GSMUA_Achr7P13350_001	Banana	mitochondrion	42.45	54.93
CDX96338	Canola	plastid	50.21	54.69
KXG22413	Sorghum	peroxisome	33.99	54.52
CDY03700	Canola	cytosol, nucleus, plastid	49.51	54.33
Bra016124.1-P	Field mustard	plastid	51.34	54.01
Zm00001d038831_P001	Maize	mitochondrion, nucleus	31.17	53.64
EES01371	Sorghum	plastid	48.8	53.15
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	52.05	52.79
Os01t0183300-01	Rice	cytosol	45.27	52.54
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	42.88	52.14
TraesCS3A01G114900.1	Wheat	cytosol	43.02	51.96
TraesCS3D01G246900.1	Wheat	cytosol	48.66	51.26
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	46.26	51.25
Os01t0716800-01	Rice	plastid	48.66	51.04
TraesCS3B01G275500.1	Wheat	cytosol	48.24	50.97
TraesCS3A01G244500.1	Wheat	cytosol	47.95	50.6
KXG22411	Sorghum	mitochondrion	42.17	50.08
GSMUA_Achr10P...	Banana	cytosol	47.25	50.0
Zm00001d043653_P004	Maize	plastid	49.22	48.95
HORVU3Hr1G067840.2	Barley	cytosol	48.52	48.18
HORVU3Hr1G020880.11	Barley	cytosol	42.74	47.94
CDY53816	Canola	cytosol	16.22	47.52
TraesCS3D01G117300.2	Wheat	mitochondrion	42.88	47.2
Zm00001d038830_P002	Maize	plastid	38.93	47.18
TraesCS1A01G357300.2	Wheat	cytosol	42.17	47.16
TraesCS1D01G361500.2	Wheat	cytosol	42.03	47.15
TraesCS1B01G373800.3	Wheat	cytosol	43.86	46.42
Zm00001d039582_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	44.71	45.88
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	43.58	45.31
Os05t0535600-00	Rice	cytosol, mitochondrion	22.57	43.72
VIT_02s0012g00550.t01	Wine grape	mitochondrion	38.22	43.15
VIT_07s0151g00590.t01	Wine grape	nucleus	33.0	41.94
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	32.72	40.92
VIT_13s0073g00680.t01	Wine grape	cytosol	23.98	39.44
VIT_01s0011g06310.t01	Wine grape	mitochondrion	24.4	39.41
VIT_14s0066g02270.t01	Wine grape	cytosol	26.52	38.84
VIT_08s0040g02520.t01	Wine grape	cytosol	26.23	38.43
KRH04678	Soybean	cytosol	18.05	37.54
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	22.71	36.18
VIT_00s0357g00110.t01	Wine grape	golgi	22.14	33.69

Protein Annotations

EntrezGene:100250966	wikigene:100250966	MapMan:27.5.4.1	Gene3D:3.60.10.10	EMBL:AM472134	ProteinID:CAN61802
ProteinID:CAN61802.1	ProteinID:CCB47906	ProteinID:CCB47906.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	UniProt:F6H6R6
EMBL:FN595244	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0046856
InterPro:IPPc	InterPro:IPR036691	EntrezGene:LOC100250966	wikigene:LOC100250966	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF128	SMART:SM00128	SUPFAM:SSF56219	TIGR:TC62383	UniParc:UPI00021089FA	ArrayExpress:VIT_18s0157g00210
EnsemblPlantsGene:VIT_18s0157g00210	EnsemblPlants:VIT_18s0157g00210.t01	unigene:Vvi.11943	RefSeq:XP_002266259	RefSeq:XP_002266259.1	SEG:seg

Description

No Description!

Coordinates

chr18:-:19035020..19047596

Molecular Weight (calculated)

80583.1 Da

IEP (calculated)

6.300

GRAVY (calculated)

-0.634

Length

709 amino acids

Sequence
(BLAST)

001: MAVGCGHNCS SFGVGLTVSP FPFKTYIQSP EVKMKNSSKR QPEAFWPRIV MRKWLNISAR ESDYSADTEE EDSDSGDSDT EDFGQWGRES RFRNDRGDGV
101: SIDPNDALPR SRRRKSETFR AQYINTKELR ICVGTWNVGG KLPSEDLDID EWLDIDNPAD IYVLGFQEIV PLNAGNIFGA EDSRPVPRWE NIIRETLNRV
201: RPMKTKYKCY SDPPSPSRFK PSDDVPDIEE DILLETDSDG DEVVHPLDEE TVGFDETGDR PVTGDKMFMD SEVSDSTEGP KSDSTEGPKS DTSMEQDLQR
301: QFSSPKRLDR LNCLRTEDYM GNAGAQSNGT LNKVLSGPSV AQSNRILTRT FSGSERIGLS WPEPPLDLLA QRVLERPNSF KAIKSFKAYR SFRTCNSFKS
401: FTNDDQRVPP EIAFLAQLDL ESLMHRKRRS CFVRIVSKQM VGIFLTIWVR RSLRKHIQNL KVSTVGVGVM GYIGNKGSVS VSMSIYQTFF CFICTHLTAG
501: EKDGDELKRN ADVQEIHRRT RFHPVSSIGL PKSILDHERI IWLGDLNYRI TLSYEKTRDL ISKKEWSKLV ATDQLVRELR KGRAFDGWSE GVLNFPPTYK
601: YESNSEKYFG EDPKAGRRTP SWCDRILSYG KGIRLLTYKR SELRFSDHRP VSAAYMAEVE VFSARKLQRA LTIMDAEIED EEILADTGVD VGMNFLRVGK
701: EAKVMEGKG

Best Arabidopsis Sequence Match ( AT1G71710.2 )
(BLAST)

001: MKKSHRQKSQ RLWAKLVMRK WLNISGRDPE YGADTDNESE NEDAREDNDD SSSDEEGGSG SRGRESKVYE NAEDAIAAAS AVVDAAAAAA EFISNDAPMK
101: LRRRNSETLR AQYINNKEIR VCVGTWNVGG ISPPSDLDID DWIEINQPAD IYVLGLQEIV PLNAGNILGA EDDRPVAKWE EVIREALNRV RPKLSGVKSY
201: SDPPSPGRFK PFEETHDIIE EEVAFESDSD AGVEIHPIDE EEEEETDRLW ALKHDGGVIG EVKTLVDPNT GLPVVEIKRQ FSIPKKLDRQ LCLRADSFKG
301: ISDDDSTQTG MKTINRMLSG KERIGLSWPE PPLNMLGPCV LDRQPSIKTV KSLKTAKSFK AYSSFKSVAG NNNGIPPEVL ALAEMDLKLL MERKRRPAYV
401: RLVSKQMVGI LLTIWVKRSL RKHIQNVRVS TVGVGVMGYI GNKGAVSVSM SINQTFFCFI NTHLTAGERE VDQIKRNADV HEIHKRTVFH SVSALGLPKL
501: IYDHERIIWL GDLNYRLSSS YEKTRDLISK REWSKLLEYD QLVKEYRKGR AFDGWSEGTL HFPPTYKYQA NSDEYTANDG KAPKRTPAWC DRVLSYGKGM
601: RLVHYRRTEQ KFSDHRPVTA IYMAEVEVFS ARKLQRALTF TDAEIEDEGL VAVLV

Arabidopsis Description

IP5P3Type IV inositol polyphosphate 5-phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Z6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.