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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 2
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:peroxisome
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038831_P001 Maize mitochondrion, nucleus 73.76 79.13
KXG22411 Sorghum mitochondrion 66.29 49.08
CDY53817 Canola nucleus 34.16 46.32
GSMUA_Achr4P08910_001 Banana endoplasmic reticulum 53.17 45.19
EES01371 Sorghum plastid 64.25 43.63
TraesCS1A01G357300.2 Wheat cytosol 61.31 42.74
TraesCS1D01G361500.2 Wheat cytosol 60.86 42.56
GSMUA_AchrUn_... Banana nucleus 55.66 42.41
CDY53820 Canola mitochondrion 27.15 41.24
TraesCS1B01G373800.3 Wheat cytosol 61.99 40.9
Bra034444.1-P Field mustard cytosol, golgi, mitochondrion, plastid 49.32 40.0
CDY28392 Canola cytosol, golgi, mitochondrion, plastid 49.32 40.0
CDX73292 Canola cytosol, endoplasmic reticulum, mitochondrion, nucleus 48.64 39.96
HORVU1Hr1G080460.7 Barley cytosol, golgi, mitochondrion, plastid 61.31 39.74
KRG91711 Soybean cytosol, mitochondrion, nucleus, plastid 53.39 37.4
KRH35060 Soybean cytosol, mitochondrion, nucleus, plastid 52.94 37.08
CDX90734 Canola mitochondrion 48.19 36.72
KRH08618 Soybean cytosol, golgi, mitochondrion, plastid 53.17 36.66
CDY05076 Canola mitochondrion 47.51 36.52
KRH70253 Soybean cytosol, endoplasmic reticulum, mitochondrion, plastid 52.71 36.46
AT1G34120.2 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 48.64 36.44
Os05t0535600-00 Rice cytosol, mitochondrion 30.09 36.34
EES15005 Sorghum cytosol 33.48 36.19
OQU89459 Sorghum cytosol 34.84 35.98
EES15004 Sorghum mitochondrion 32.13 35.59
Bra000691.1-P Field mustard mitochondrion 47.74 35.4
PGSC0003DMT400064482 Potato cytosol, mitochondrion, nucleus, plastid 53.39 35.38
VIT_18s0157g00210.t01 Wine grape plastid 54.52 33.99
EES00172 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 49.09 33.91
CDX72820 Canola cytosol, nucleus, plastid 48.64 33.75
CDX68304 Canola cytosol, nucleus, plastid 48.19 33.49
CDX96338 Canola plastid 48.64 33.03
CDY37949 Canola cytosol, nucleus, plastid 45.93 32.85
AT1G71710.1 Thale cress cytosol, nucleus, plastid 49.32 32.83
Bra003916.1-P Field mustard cytosol, nucleus, plastid 48.87 32.63
KXG19625 Sorghum nucleus 37.56 32.49
EER98050 Sorghum cytosol 41.18 31.99
Bra016124.1-P Field mustard plastid 48.64 31.9
EER93309 Sorghum nucleus 40.5 31.74
CDY03700 Canola cytosol, nucleus, plastid 46.15 31.58
KXG39809 Sorghum nucleus 34.84 30.99
EER92819 Sorghum cytosol, mitochondrion, nucleus 40.5 30.92
Bra007969.1-P Field mustard cytosol, nucleus, plastid 48.42 30.62
KXG37885 Sorghum nucleus 38.24 30.4
OQU87743 Sorghum plastid 37.78 30.31
EES18414 Sorghum nucleus, plastid 36.43 29.7
EER91601 Sorghum nucleus 39.37 29.59
KXG27642 Sorghum plastid 37.56 29.28
KXG30738 Sorghum nucleus 37.56 28.72
EES18903 Sorghum nucleus 34.84 28.36
KRH04678 Soybean cytosol 20.14 26.1
CDY53816 Canola cytosol 14.03 25.62
Protein Annotations
MapMan:27.5.4.1Gene3D:3.60.10.10UniProt:A0A1B6P9P6InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0046856InterPro:IPPcInterPro:IPR036691EnsemblPlants:KXG22413ProteinID:KXG22413ProteinID:KXG22413.1
PFAM:PF03372PANTHER:PTHR11200PANTHER:PTHR11200:SF139SMART:SM00128EnsemblPlantsGene:SORBI_3009G211600SUPFAM:SSF56219
UniParc:UPI00081AC033SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:-:55752795..55758001
Molecular Weight (calculated)
50636.8 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.468
Length
442 amino acids
Sequence
(BLAST)
001: MAFPAASPRA PRMADHQDSQ MEAAPCRLRR QKSEIIRAQY VDVRELRICA GTWNVGSICP PNDLDIQEWL DIDEPADIYV LGFQEIIPLE EGYMIGTEDT
101: RPVAIWEHII HETLNKKCSD KSKFKCRNFP PARFNPSDCV FVMDNELHNE SNNNSNGELH LSHNAKSSNS ARHLQPLDLA CGVNNYSGVK RKRHQYIRVI
201: SKQMVGVFLS VWVRRSLQKH IQNLRVSIVG VGTRGFIGNK GSISVSMTIH ETHFCFVCCH LASGEKNGDE LKRNTNVEEI HRRTGFNPIH MVGMPRRIHD
301: HERIILLGDL NYRLNLSYET THELISKQDW DALFKMDQLK KELGKGCTFD GWVEGPIIFP PTYKYEFNSE KYVSDATKSG RRTPAWCDRI LSYGKGTKLL
401: SYKRAELMLS DHRPVTAVYM ADVEVVCLRR LQKALTFSKC RA
Best Arabidopsis Sequence Match ( AT1G71710.2 )
(BLAST)
001: MKKSHRQKSQ RLWAKLVMRK WLNISGRDPE YGADTDNESE NEDAREDNDD SSSDEEGGSG SRGRESKVYE NAEDAIAAAS AVVDAAAAAA EFISNDAPMK
101: LRRRNSETLR AQYINNKEIR VCVGTWNVGG ISPPSDLDID DWIEINQPAD IYVLGLQEIV PLNAGNILGA EDDRPVAKWE EVIREALNRV RPKLSGVKSY
201: SDPPSPGRFK PFEETHDIIE EEVAFESDSD AGVEIHPIDE EEEEETDRLW ALKHDGGVIG EVKTLVDPNT GLPVVEIKRQ FSIPKKLDRQ LCLRADSFKG
301: ISDDDSTQTG MKTINRMLSG KERIGLSWPE PPLNMLGPCV LDRQPSIKTV KSLKTAKSFK AYSSFKSVAG NNNGIPPEVL ALAEMDLKLL MERKRRPAYV
401: RLVSKQMVGI LLTIWVKRSL RKHIQNVRVS TVGVGVMGYI GNKGAVSVSM SINQTFFCFI NTHLTAGERE VDQIKRNADV HEIHKRTVFH SVSALGLPKL
501: IYDHERIIWL GDLNYRLSSS YEKTRDLISK REWSKLLEYD QLVKEYRKGR AFDGWSEGTL HFPPTYKYQA NSDEYTANDG KAPKRTPAWC DRVLSYGKGM
601: RLVHYRRTEQ KFSDHRPVTA IYMAEVEVFS ARKLQRALTF TDAEIEDEGL VAVLV
Arabidopsis Description
IP5P3Type IV inositol polyphosphate 5-phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Z6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.