CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0489000-01	Rice	nucleus	82.1	80.62
TraesCS1A01G305800.2	Wheat	plastid	79.7	78.12
TraesCS1B01G316500.1	Wheat	plastid	79.52	77.94
TraesCS1D01G305500.1	Wheat	mitochondrion	79.34	73.88
OQU87743	Sorghum	plastid	71.22	70.05
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	49.45	68.02
Bra005834.1-P	Field mustard	endoplasmic reticulum	30.81	66.8
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	79.52	65.4
CDY70508	Canola	cytosol	39.85	64.09
VIT_13s0073g00680.t01	Wine grape	cytosol	48.52	61.02
Zm00001d038530_P003	Maize	plastid	90.96	56.02
AT5G04980.2	Thale cress	nucleus	46.68	54.29
CDY04934	Canola	nucleus	47.23	54.12
CDY14134	Canola	plastid	47.05	53.91
Bra028775.1-P	Field mustard	nucleus	47.23	53.89
CDX80935	Canola	nucleus	46.49	53.39
KRH13212	Soybean	nucleus	47.97	51.49
KRH20549	Soybean	nucleus	47.79	51.08
KXG27642	Sorghum	plastid	52.4	50.09
KXG19625	Sorghum	nucleus	47.05	49.9
KXG30738	Sorghum	nucleus	48.16	45.16
EER98050	Sorghum	cytosol	42.8	40.77
EER92819	Sorghum	cytosol, mitochondrion, nucleus	41.7	39.03
EER93309	Sorghum	nucleus	40.59	39.01
KXG37885	Sorghum	nucleus	39.67	38.67
EER91601	Sorghum	nucleus	41.51	38.27
EES15005	Sorghum	cytosol	28.04	37.16
OQU89459	Sorghum	cytosol	29.34	37.15
EES15004	Sorghum	mitochondrion	27.12	36.84
KXG22413	Sorghum	peroxisome	29.7	36.43
KXG39809	Sorghum	nucleus	32.29	35.21
EES18903	Sorghum	nucleus	34.5	34.44
KXG22411	Sorghum	mitochondrion	32.29	29.31
EES01371	Sorghum	plastid	33.21	27.65
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	31.55	26.72

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8077025	UniProt:C5YZX2	EnsemblPlants:EES18414	ProteinID:EES18414
ProteinID:EES18414.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	ProteinID:KXG22240.1	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF187	SMART:SM00128
EnsemblPlantsGene:SORBI_3009G178300	SUPFAM:SSF56219	unigene:Sbi.11318	UniParc:UPI0001A889F0	RefSeq:XP_002439984.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:53308454..53314021

Molecular Weight (calculated)

61077.1 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.585

Length

542 amino acids

Sequence
(BLAST)

001: MSFSDDGKMK GCQPNLFRTK DKKVAKRTDR AGCSTSKSGS SNSKSPSSSP FRKLSEVRSI RLSHFLSHSS NATKYEHVRI FVSTWNVGGK APTAELKLDD
101: FLPADDHSDI YVLGFQEIVP LNAGNVLVIE DNEPAARWLA LINRALNQPV DTDADIFQHK PSPSLDSTSS QSTPGLDGSF SNRSRTASGS VIFQKSLKSI
201: RKSYMPSQRK LLKFCNCPVE MAKKSYKDAC FRCPRPQAYA NEMDSSEEDE LDDKLNDIFG LNDDDVTSSA SASRDQLKYN LISCKQMVGI FVTVWAKKEL
301: VQHIGHVRTS CVGRGIMGYL GNKGCISVSM TLYQTSFCFI CSHLASGEKE GDELRRNLDV LEILRLTQFR RICRRAGRRI PEKILDHERV IWLGDLNYRI
401: SLSYEDTKKL LTENNWDALF EKDQLNIQRA SGSVFKGWSE EKIYFAPTYK YSCNSDSYAG ETATSKKKRR TPAWCDRILW HGDGIAQLSY FRGESQFSDH
501: RPVCGTFIVD AERLDGKSKR RSSNTNIRIG AEELLPTSNK HN

Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)

001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.