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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005834.1-P Field mustard endoplasmic reticulum 74.18 100.0
CDX80935 Canola nucleus 98.81 70.55
CDY14134 Canola plastid 95.85 68.29
CDY04934 Canola nucleus 95.85 68.29
AT5G04980.2 Thale cress nucleus 93.77 67.81
GSMUA_Achr11P... Banana cytosol, mitochondrion 66.47 56.85
VIT_13s0073g00680.t01 Wine grape cytosol 72.7 56.84
CDY33984 Canola nucleus 64.09 45.67
KRH13212 Soybean nucleus 66.47 44.36
KRH20549 Soybean nucleus 66.47 44.18
CDX79733 Canola nucleus 55.49 42.5
Zm00001d012534_P001 Maize nucleus, plastid 66.17 40.84
OQU87743 Sorghum plastid 65.58 40.11
CDX91363 Canola mitochondrion 56.68 39.96
EES18414 Sorghum nucleus, plastid 64.09 39.85
CDY31285 Canola nucleus 64.09 39.13
Os05t0489000-01 Rice nucleus 64.09 39.13
TraesCS1A01G305800.2 Wheat plastid 63.2 38.52
TraesCS1B01G316500.1 Wheat plastid 62.91 38.34
CDY18445 Canola mitochondrion 56.38 38.31
CDY07789 Canola mitochondrion 52.23 38.1
CDX74960 Canola mitochondrion 56.38 38.08
CDY15795 Canola mitochondrion 48.37 38.0
CDY09402 Canola mitochondrion 48.37 38.0
CDX93379 Canola mitochondrion 55.49 37.7
TraesCS3A01G338100.1 Wheat nucleus, plastid 64.69 37.52
TraesCS3D01G331600.1 Wheat nucleus, plastid 64.69 37.52
HORVU3Hr1G079850.4 Barley cytosol 64.39 37.29
CDY08822 Canola nucleus 63.8 37.13
CDY53817 Canola nucleus 35.91 37.12
CDY14538 Canola nucleus 63.8 37.07
TraesCS1D01G305500.1 Wheat mitochondrion 62.91 36.43
CDY56450 Canola mitochondrion 59.35 35.59
CDX76691 Canola cytosol, mitochondrion, nucleus 59.05 35.47
CDY15360 Canola nucleus 58.46 35.3
CDY15542 Canola nucleus 57.27 35.22
CDX86576 Canola nucleus 57.57 34.58
CDY10113 Canola nucleus 56.97 34.41
CDY53820 Canola mitochondrion 29.67 34.36
CDY47282 Canola nucleus 56.97 34.35
CDY60962 Canola cytosol, golgi, nucleus 58.75 34.08
TraesCS3B01G369700.1 Wheat nucleus 64.39 33.8
CDX78819 Canola nucleus 35.91 33.61
HORVU1Hr1G068860.1 Barley endoplasmic reticulum, plastid 62.91 32.17
Os01t0814200-01 Rice cytosol, nucleus, peroxisome 24.93 30.32
CDX73292 Canola cytosol, endoplasmic reticulum, mitochondrion, nucleus 45.7 28.62
CDY28392 Canola cytosol, golgi, mitochondrion, plastid 46.29 28.62
CDY05076 Canola mitochondrion 47.18 27.65
CDX90734 Canola mitochondrion 47.18 27.41
CDY44496 Canola nucleus 47.77 25.76
CDX68304 Canola cytosol, nucleus, plastid 48.07 25.47
CDX90428 Canola nucleus 47.77 25.16
CDX72820 Canola cytosol, nucleus, plastid 46.88 24.8
Zm00001d038530_P003 Maize plastid 64.39 24.66
CDX96338 Canola plastid 47.18 24.42
CDY37949 Canola cytosol, nucleus, plastid 43.92 23.95
CDY03700 Canola cytosol, nucleus, plastid 44.51 23.22
CDY68359 Canola nucleus 32.94 20.94
CDY53816 Canola cytosol 11.87 16.53
Protein Annotations
MapMan:27.5.4.1Gene3D:3.60.10.10GO:A0A078JSC1UniProt:A0A078JSC1EnsemblPlants:CDY70508ProteinID:CDY70508
ProteinID:CDY70508.1InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046856EnsemblPlantsGene:GSBRNA2T00003927001
InterPro:IPPcInterPro:IPR036691PFAM:PF03372PANTHER:PTHR11200PANTHER:PTHR11200:SF112SMART:SM00128
SUPFAM:SSF56219UniParc:UPI0004EF2413SEG:seg:::
Description
BnaAnng33950DBnaAnng33950D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSC1]
Coordinates
chrLK042330:-:1121..3185
Molecular Weight (calculated)
38150.8 Da
IEP (calculated)
9.810
GRAVY (calculated)
-0.298
Length
337 amino acids
Sequence
(BLAST)
001: VFVATWNVGG KSPHSGLDLD SLFHVHSEFD IYVLGFQEIV PLNAGNVLVL GDNEPAAKWL SMINQSLNKS SSSSSSGGKV ASIVNSQMMM KYGLVASKQM
101: VGIFLTVWMR KELIQHVTHL RISCVSRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN SDVIEILKNT SFPRICRTSF TRVPHRITKH
201: DRVIWLGDLN YRIALSYSET KSLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTTKEKK NKRRTPAWCD RILWHGDGIR
301: QLSYVRGESR FSDHRPVCAV FVVNVEVCEG RTGTRRQ
Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)
001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ
Arabidopsis Description
IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.