CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012624.1-P	Field mustard	nucleus	97.03	99.68
CDY68359	Canola	nucleus	80.78	97.55
CDX78819	Canola	nucleus	52.03	92.5
CDY44496	Canola	nucleus	86.72	88.8
AT4G18010.1	Thale cress	nucleus	89.22	88.39
KRH37570	Soybean	cytosol	10.78	61.61
KRG89576	Soybean	cytosol	10.78	61.61
GSMUA_Achr9P23430_001	Banana	mitochondrion	43.91	59.79
KRH04304	Soybean	cytosol, mitochondrion, nucleus	58.75	59.78
KRH57586	Soybean	nucleus	57.97	59.46
KRH77232	Soybean	cytosol	53.12	59.44
KRH28263	Soybean	cytosol	57.81	58.73
VIT_02s0012g00550.t01	Wine grape	mitochondrion	57.03	58.12
PGSC0003DMT400052816	Potato	mitochondrion	54.69	56.54
GSMUA_Achr3P27520_001	Banana	mitochondrion	44.38	56.46
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	54.06	55.9
Solyc08g077210.2.1	Tomato	mitochondrion	53.75	54.6
PGSC0003DMT400062236	Potato	mitochondrion	53.75	54.6
CDY70508	Canola	cytosol	25.16	47.77
CDY53817	Canola	nucleus	21.72	42.64
CDX79733	Canola	nucleus	28.28	41.14
CDX91363	Canola	mitochondrion	30.62	41.0
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	34.53	40.55
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	33.91	40.33
CDX74960	Canola	mitochondrion	30.94	39.68
CDY53820	Canola	mitochondrion	17.97	39.52
CDY07789	Canola	mitochondrion	28.28	39.18
CDY15795	Canola	mitochondrion	26.25	39.16
CDY09402	Canola	mitochondrion	26.25	39.16
CDY56450	Canola	mitochondrion	34.38	39.15
CDY18445	Canola	mitochondrion	30.16	38.91
CDX76691	Canola	cytosol, mitochondrion, nucleus	34.06	38.86
CDX90734	Canola	mitochondrion	35.16	38.79
CDY05076	Canola	mitochondrion	34.84	38.78
CDX93379	Canola	mitochondrion	30.0	38.71
CDY15360	Canola	nucleus	32.97	37.81
CDY15542	Canola	nucleus	31.88	37.23
CDY10113	Canola	nucleus	31.88	36.56
CDX86576	Canola	nucleus	32.03	36.54
CDY47282	Canola	nucleus	31.88	36.49
Zm00001d019672_P002	Maize	cytosol	28.44	36.47
CDX80935	Canola	nucleus	26.88	36.44
CDY60962	Canola	cytosol, golgi, nucleus	32.97	36.32
CDY04934	Canola	nucleus	26.72	36.15
CDY14134	Canola	plastid	26.56	35.94
CDX72820	Canola	cytosol, nucleus, plastid	35.0	35.16
CDY33984	Canola	nucleus	25.94	35.1
CDX96338	Canola	plastid	35.31	34.72
CDY37949	Canola	cytosol, nucleus, plastid	33.28	34.47
CDX68304	Canola	cytosol, nucleus, plastid	33.75	33.96
CDY03700	Canola	cytosol, nucleus, plastid	33.12	32.82
CDY31285	Canola	nucleus	27.34	31.7
CDY08822	Canola	nucleus	28.12	31.09
CDY14538	Canola	nucleus	28.12	31.03
CDY53816	Canola	cytosol	11.09	29.34

Protein Annotations

EnsemblPlants:CDX90428	EnsemblPlantsGene:GSBRNA2T00151035001	Gene3D:3.60.10.10	GO:A0A078DT95	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF236	PFAM:PF03372	ProteinID:CDX90428	ProteinID:CDX90428.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EDBFC6	MapMan:27.5.4.1	:

Description

BnaA03g43530D

Coordinates

chrLK031863:+:140786..146715

Molecular Weight (calculated)

72545.1 Da

IEP (calculated)

7.354

GRAVY (calculated)

-0.723

Length

640 amino acids

Sequence
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNIKPKVYD FSEDEVDTEN ESEDDVCSVK NVSNACCVAD EDSHGGHQAD HGKKISDGGV RGNQRKHRRG KSETLRVQYI
101: NTKDIRVTVA TWNVAGKRPS DDLDIDDWLS TDNPSDIYII GFQEVVPLNA GNVFGAEDRG PIPRWESIIR RTLNKPQKES VNDQSSSNNN VLHRSHSAPS
201: SPVLAQQANS IIADVMVENL AADHSLDLAT DEFIDAATAL PSLEPVGNPD MDWPERALDE NPQIVGSEGK LRRVLSSNAM LGFKLPENPT GVSRFASDAR
301: NLKRSRSFET LKLSWNDIKE ENDNTSSSSS LSEAEEAAKA MSDDSLDGES SSDEGDKIRN TYSLSEDLVK ECRKVKDCQK YVRIVSKQMV GIYVSVWIRR
401: RLRRHVNNLK VSPVGVGLMG YMGNKGSVSI SMTLYQSRMC FVCSHLTSGQ KEGAEQRRNA DVYEIIRRTR FSSVLDTDQP RTIPCHDQVF WFGDLNYRLN
501: MSDSEVRKLV AQKRWDELKN SDQLIRELRR GHVFDGWREG PIKFPPTYKY EFDSDRYAGE NLKEGEKKRA PAWCDRILWL GKGIRQECYK RSEIRMSDHR
601: PVTSIFNVGV EVFDQRKLQR ALHVNNAAAS AVHPEPAFSV

Best Arabidopsis Sequence Match ( AT4G18010.1 )
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNRKPKVYD FSEDEIDTEP ESEDDVCSVK DVPNVHCVTD EDSHNGRRGS EADHGNNISD GGVSVRGGYQ RKHRRGKSET
101: LRAQYINTKD IKVTVATWNV AGKRPSDDLE IEDWLSTDNP SDIYIIGFQE VVPLNAGNVF GAEDRGPIPK WESIIRRTLN KSNKESVYDQ SPSCNNNALH
201: RSHSAPSSPI LAQEANSIIS HVMVENLVAD HSLDLATNEF IDAATALPSL EPQRNPNMDW PELALDSNPQ IVGSEGKLRR VFSSNATLGF KLPENPSGAS
301: RFASEARQLK RSRSFETLNL SWNDIKEEID NRSSSSSEAE EAAKIMHDDS SDGDSSSQDE EDGDKIRNSY GLPEDLVEEC RKVKDSQKYV RIVSKQMVGI
401: YVSVWIRRRL RRHVNNLKVS PVGVGLMGYM GNKGSVSISM TLYQSRMCFV CSHLTSGHKD GAEQRRNADV YEIIRRTRFA SVLDTDQPRT IPCHDQVFWF
501: GDLNYRLNMS DGEVRKLVSQ KRWDELKNSD QLIRELRRGH VFDGWREGPI KFPPTYKYEF DSDRYAGENL REPEKKRAPA WCDRILWLGK GIRQECYKRS
601: EIRMSDHRPV TSIFNVGVEV FDHRKLQRAL HVNNAAASAV HPEPSF

Arabidopsis Description

IP5P2Type I inositol polyphosphate 5-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.