CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028775.1-P	Field mustard	nucleus	98.31	97.89
CDY04934	Canola	nucleus	97.89	97.89
CDY70508	Canola	cytosol	68.29	95.85
AT5G04980.2	Thale cress	nucleus	91.54	92.92
CDX80935	Canola	nucleus	91.54	91.74
VIT_13s0073g00680.t01	Wine grape	cytosol	60.04	65.89
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	48.84	58.63
KRH13212	Soybean	nucleus	54.97	51.49
KRH20549	Soybean	nucleus	54.97	51.28
CDY33984	Canola	nucleus	50.95	50.95
Zm00001d012534_P001	Maize	nucleus, plastid	54.55	47.25
EES18414	Sorghum	nucleus, plastid	53.91	47.05
OQU87743	Sorghum	plastid	54.55	46.82
Os05t0489000-01	Rice	nucleus	53.91	46.2
TraesCS1A01G305800.2	Wheat	plastid	53.28	45.57
TraesCS1B01G316500.1	Wheat	plastid	53.07	45.39
CDX79733	Canola	nucleus	40.8	43.86
CDY31285	Canola	nucleus	50.95	43.66
TraesCS3D01G331600.1	Wheat	nucleus, plastid	53.28	43.37
TraesCS3A01G338100.1	Wheat	nucleus, plastid	53.07	43.2
TraesCS1D01G305500.1	Wheat	mitochondrion	53.07	43.13
HORVU3Hr1G079850.4	Barley	cytosol	52.64	42.78
CDY08822	Canola	nucleus	51.16	41.8
CDY14538	Canola	nucleus	51.16	41.72
CDX91363	Canola	mitochondrion	41.65	41.21
Os01t0814200-01	Rice	cytosol, nucleus, peroxisome	24.1	41.16
CDY18445	Canola	mitochondrion	41.86	39.92
CDX74960	Canola	mitochondrion	41.86	39.68
CDY07789	Canola	mitochondrion	38.48	39.39
CDX93379	Canola	mitochondrion	41.01	39.11
CDY15360	Canola	nucleus	46.09	39.07
TraesCS3B01G369700.1	Wheat	nucleus	52.85	38.94
CDY15795	Canola	mitochondrion	35.31	38.93
CDY09402	Canola	mitochondrion	35.31	38.93
CDY15542	Canola	nucleus	44.4	38.32
CDY56450	Canola	mitochondrion	45.45	38.26
CDX76691	Canola	cytosol, mitochondrion, nucleus	45.24	38.15
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	53.07	38.09
CDY60962	Canola	cytosol, golgi, nucleus	46.51	37.87
CDX86576	Canola	nucleus	44.61	37.61
CDY53817	Canola	nucleus	25.79	37.42
CDY10113	Canola	nucleus	43.97	37.28
CDY47282	Canola	nucleus	43.97	37.21
CDY53820	Canola	mitochondrion	21.56	35.05
CDX78819	Canola	nucleus	26.43	34.72
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.46	30.3
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	34.88	30.28
Zm00001d038530_P003	Maize	plastid	53.91	28.98
CDY05076	Canola	mitochondrion	35.1	28.87
CDX90734	Canola	mitochondrion	35.31	28.79
CDY44496	Canola	nucleus	36.15	27.36
CDX68304	Canola	cytosol, nucleus, plastid	35.73	26.57
CDX90428	Canola	nucleus	35.94	26.56
CDX72820	Canola	cytosol, nucleus, plastid	35.1	26.06
CDX96338	Canola	plastid	35.52	25.81
CDY37949	Canola	cytosol, nucleus, plastid	33.19	25.4
CDY03700	Canola	cytosol, nucleus, plastid	33.4	24.46
CDY68359	Canola	nucleus	24.95	22.26
CDY53816	Canola	cytosol	9.51	18.59

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078FMP5	UniProt:A0A078FMP5	EnsemblPlants:CDY14134	ProteinID:CDY14134
ProteinID:CDY14134.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00078680001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF112	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EEE2EB	SEG:seg	:	:	:

Description

BnaC02g02510DBnaC02g02510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMP5]

Coordinates

chrLK032040:+:573389..576013

Molecular Weight (calculated)

53541.6 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.467

Length

473 amino acids

Sequence
(BLAST)

001: MSDPLYIFNK SQSKIVVESL LSSSNLRSSM PTQQLQSLRV FVATWNVGGK SPHSGLDLDD LLHVHSEFDI YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS ASSSSSGGRL GPKTPSFGAG SMFFAKPSLK KISESFRTDC RRKLKICNCN SFSEEIVKKY GRESCFRCPE SLVNQTDLLC DDDEDDEDED
201: EDDDDDDEDE EGGEKVASLV SNQMMMKYGL VASKQMVGIF LTVWMRKELI QHVTHLRISC VTRGIMGCLG NKGCIAVSLQ LYKTSFCFIC SHLASGEREG
301: DERRRNSDVI EILKNTTFPR ICRTSFTRVP NRITKHDRVI WLGDLNYRIA LSYTETKTLL DKNAWDTLLN KDQLKIERDA GRVFKGWHEG KIFFAPTYKY
401: SYNSDAYAGD TTKEKKNKRR TPAWCDRILW HGDGIRQLSY VRGESRFSDH RPVCSVFVVN VEVCEGRTGA RRQ

Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)

001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.