Factsheet for TraesCS3B01G369700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G331600.1	Wheat	nucleus, plastid	88.16	97.42
TraesCS3A01G338100.1	Wheat	nucleus, plastid	87.85	97.07
HORVU3Hr1G079850.4	Barley	cytosol	85.36	94.16
Zm00001d012534_P001	Maize	nucleus, plastid	67.91	79.85
OQU87743	Sorghum	plastid	67.76	78.95
Os01t0814200-01	Rice	cytosol, nucleus, peroxisome	33.8	78.34
TraesCS1B01G316500.1	Wheat	plastid	58.57	67.99
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	41.43	67.51
Bra005834.1-P	Field mustard	endoplasmic reticulum	26.17	67.2
CDY70508	Canola	cytosol	33.8	64.39
VIT_13s0073g00680.t01	Wine grape	cytosol	40.03	59.63
CDY14134	Canola	plastid	38.94	52.85
CDY04934	Canola	nucleus	38.94	52.85
AT5G04980.2	Thale cress	nucleus	38.32	52.79
CDX80935	Canola	nucleus	38.78	52.75
Bra028775.1-P	Field mustard	nucleus	38.94	52.63
KRH20549	Soybean	nucleus	39.88	50.49
KRH13212	Soybean	nucleus	39.56	50.3
TraesCS7B01G086400.2	Wheat	nucleus, plastid	40.19	49.24
TraesCS4B01G129000.1	Wheat	nucleus, plastid	41.74	46.61
TraesCS6B01G331500.1	Wheat	nucleus, plastid	40.03	42.83
TraesCS5B01G434000.1	Wheat	nucleus	34.74	39.47
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	35.36	38.87
TraesCS4B01G230100.1	Wheat	cytosol	27.88	38.58
TraesCS4B01G017400.1	Wheat	nucleus	33.18	37.77
TraesCS5B01G201300.1	Wheat	cytosol	24.61	37.18
TraesCS1B01G052100.1	Wheat	plastid	31.0	33.73
TraesCS1B01G373800.3	Wheat	cytosol	29.59	28.36
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	23.83	26.24
TraesCS3B01G275500.1	Wheat	cytosol	27.1	25.93

Protein Annotations

EnsemblPlants:TraesCS3B01G369700.1	EnsemblPlantsGene:TraesCS3B01G369700	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF187	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:581702512..581710090

Molecular Weight (calculated)

71680.2 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.543

Length

642 amino acids

Sequence
(BLAST)

001: MASPGEEKMK GCRPKLFGAK EKKSAKRTDS PGCNAAHELG PSPSKTVSAS PLRTLSGVKS IRLSHFLAQP SSINRTTEPV RIFVSTWNVG GKAPTAELNM
101: DDFVPPDDRS DIYVLGFQEI VPLNAGNVLV VKLLPCDHEV MGSSPGNSLL QKCRERLRTI DPKWSDPSLD PAQAGATCTR LPFFNAGNVL VIEDNEPAAR
201: WLVLINQALN RPADNDTNVF QHPTSPSVDS TSSRASSSLD TSFSELTKTA SGSTIFQKSS LKAIRKPFMP MQRKRLKACN CPAEMIKSSY RDACFRRPKK
301: HAGETDSSGE EEKENTRDSC GSVLSEVTSA PTARDQLKYN LIVCKQMVGI FVTVWVKKEL VQHIGHLRTS CIGRGILGCL GNKGCISVSM TVHQTSFCFI
401: CSHLASGQKE GDEFRRNSDV LEIMRLTLFS RLCRKIGRRI PEKILEHDKV IWFGDLNYRI ALSYEDTKRL LTENNWDALF EKDQLKIERD AGRVFRGWNE
501: GKIYFAPTYK YSSNSDAYAG ETATSNKKRR TPAWCDRILW QGDGTSQLSY YRGESRFSDH RPVCGTFIVE VEALNRKTKR RSSNADMKIG AEELLPTDKN
601: KGKEEPAHWD SSCASPTPPD QSSTPWWRRC CYLSNHDVLV KA

Best Arabidopsis Sequence Match ( AT5G04980.1 )
(BLAST)

001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.