CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005834.1-P	Field mustard	endoplasmic reticulum	52.54	99.2
CDY70508	Canola	cytosol	70.55	98.81
CDY04934	Canola	nucleus	92.37	92.18
CDY14134	Canola	plastid	91.74	91.54
AT5G04980.2	Thale cress	nucleus	89.62	90.77
VIT_13s0073g00680.t01	Wine grape	cytosol	60.17	65.89
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	48.73	58.38
KRH13212	Soybean	nucleus	55.3	51.68
KRH20549	Soybean	nucleus	55.3	51.48
CDY33984	Canola	nucleus	50.64	50.53
Zm00001d012534_P001	Maize	nucleus, plastid	53.81	46.52
EES18414	Sorghum	nucleus, plastid	53.39	46.49
TraesCS1A01G305800.2	Wheat	plastid	53.39	45.57
OQU87743	Sorghum	plastid	53.18	45.55
TraesCS1B01G316500.1	Wheat	plastid	53.18	45.39
Os05t0489000-01	Rice	nucleus	52.75	45.11
CDY31285	Canola	nucleus	50.64	43.3
TraesCS1D01G305500.1	Wheat	mitochondrion	53.18	43.13
TraesCS3D01G331600.1	Wheat	nucleus, plastid	52.97	43.03
TraesCS3A01G338100.1	Wheat	nucleus, plastid	52.97	43.03
CDX79733	Canola	nucleus	40.04	42.95
HORVU3Hr1G079850.4	Barley	cytosol	52.54	42.61
CDY08822	Canola	nucleus	51.06	41.62
CDY14538	Canola	nucleus	51.06	41.55
CDX91363	Canola	mitochondrion	41.1	40.59
Os01t0814200-01	Rice	cytosol, nucleus, peroxisome	23.52	40.07
CDY18445	Canola	mitochondrion	41.53	39.52
CDX74960	Canola	mitochondrion	41.31	39.08
CDY15795	Canola	mitochondrion	35.38	38.93
CDY09402	Canola	mitochondrion	35.38	38.93
TraesCS3B01G369700.1	Wheat	nucleus	52.75	38.78
CDX93379	Canola	mitochondrion	40.47	38.51
CDY15360	Canola	nucleus	45.34	38.35
CDY53817	Canola	nucleus	26.48	38.34
CDY07789	Canola	mitochondrion	37.5	38.31
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	53.39	38.24
CDY15542	Canola	nucleus	44.28	38.14
CDY56450	Canola	mitochondrion	44.92	37.72
CDX76691	Canola	cytosol, mitochondrion, nucleus	44.49	37.43
CDY60962	Canola	cytosol, golgi, nucleus	45.76	37.18
CDX86576	Canola	nucleus	44.07	37.08
CDY10113	Canola	nucleus	43.64	36.92
CDY47282	Canola	nucleus	43.64	36.85
CDY53820	Canola	mitochondrion	22.25	36.08
CDX78819	Canola	nucleus	26.69	35.0
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.75	30.48
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	35.17	30.46
CDY05076	Canola	mitochondrion	35.59	29.22
CDX90734	Canola	mitochondrion	35.81	29.14
Zm00001d038530_P003	Maize	plastid	53.18	28.52
CDY44496	Canola	nucleus	36.02	27.2
CDX68304	Canola	cytosol, nucleus, plastid	36.44	27.04
CDX90428	Canola	nucleus	36.44	26.88
CDX72820	Canola	cytosol, nucleus, plastid	35.38	26.22
CDX96338	Canola	plastid	35.81	25.96
CDY37949	Canola	cytosol, nucleus, plastid	33.47	25.57
CDY03700	Canola	cytosol, nucleus, plastid	33.69	24.61
CDY68359	Canola	nucleus	25.64	22.83
CDY53816	Canola	cytosol	9.53	18.59

Protein Annotations

EnsemblPlants:CDX80935	EnsemblPlantsGene:GSBRNA2T00134349001	Gene3D:3.60.10.10	GO:A0A078CVP4	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF112	PFAM:PF03372	ProteinID:CDX80935	ProteinID:CDX80935.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EE85F7	MapMan:27.5.4.1	:

Description

BnaC03g01890D

Coordinates

chrLK031823:-:910887..913494

Molecular Weight (calculated)

53487.5 Da

IEP (calculated)

8.202

GRAVY (calculated)

-0.475

Length

472 amino acids

Sequence
(BLAST)

001: MSDPLYIFNK KYQSETVVES LLSSSNFRSS MPAQQLQSLR VFVATWNVGG KSPHSGLDLD SLFHVHSEFD IYVLGFQEIV PLNAGNVLVL GDNEPAAKWL
101: SMINQSLNKS SSSSSSGGRF VPKPPAFGAG SMFFVKPSLK KISENFRTGC RRKLKICNCS SFSEEISRKY GRESCFRCPE SLVNQTDLFS DDDEEEEDDD
201: DDEEEEDEEG GGGKVASIVS NQMMMKYGLV ASKQMVGIFL TVWMRKELIQ HVTHLRISCV SRGIMGCLGN KGCIAVSLQL YKTSFCFICS HLASGEREGD
301: ERRRNSDVIE ILKNTSFPRI CRTSFTRVPH RITKHDRVIW LGDLNYRIAL SYSETKSLLD KNAWDTLLNK DQLKIERDAG RVFKGWHEGK IFFAPTYKYS
401: YNSDAYAGDT TKEKKNKRRT PAWCDRILWH GDGTRQLSYV RGESRFSDHR PVCAVFVVNV EVCEGKTGTR RQ

Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)

001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.