Factsheet for TraesCS1B01G316500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G305800.2	Wheat	plastid	99.46	99.46
TraesCS1D01G305500.1	Wheat	mitochondrion	98.92	93.99
Os05t0489000-01	Rice	nucleus	81.92	82.07
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	96.93	81.34
EES18414	Sorghum	nucleus, plastid	77.94	79.52
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	47.56	66.75
Bra005834.1-P	Field mustard	endoplasmic reticulum	29.66	65.6
CDY70508	Canola	cytosol	38.34	62.91
VIT_13s0073g00680.t01	Wine grape	cytosol	45.75	58.7
TraesCS3B01G369700.1	Wheat	nucleus	67.99	58.57
AT5G04980.2	Thale cress	nucleus	45.39	53.86
CDY04934	Canola	nucleus	45.75	53.49
Bra028775.1-P	Field mustard	nucleus	45.75	53.26
CDX80935	Canola	nucleus	45.39	53.18
CDY14134	Canola	plastid	45.39	53.07
KRH13212	Soybean	nucleus	47.38	51.88
KRH20549	Soybean	nucleus	47.56	51.87
TraesCS4B01G129000.1	Wheat	nucleus, plastid	50.45	48.52
TraesCS7B01G086400.2	Wheat	nucleus, plastid	45.21	47.71
Zm00001d038530_P003	Maize	plastid	73.96	46.48
TraesCS6B01G331500.1	Wheat	nucleus, plastid	45.93	42.33
TraesCS5B01G434000.1	Wheat	nucleus	41.77	40.88
TraesCS4B01G230100.1	Wheat	cytosol	32.19	38.36
TraesCS4B01G017400.1	Wheat	nucleus	38.88	38.12
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	40.14	38.01
TraesCS5B01G201300.1	Wheat	cytosol	29.11	37.88
TraesCS1B01G052100.1	Wheat	plastid	34.36	32.2
TraesCS1B01G373800.3	Wheat	cytosol	33.63	27.76
TraesCS3B01G275500.1	Wheat	cytosol	32.37	26.68
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	27.85	26.42

Protein Annotations

EnsemblPlants:TraesCS1B01G316500.1	EnsemblPlantsGene:TraesCS1B01G316500	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF187	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:541000540..541004241

Molecular Weight (calculated)

61844.2 Da

IEP (calculated)

9.451

GRAVY (calculated)

-0.524

Length

553 amino acids

Sequence
(BLAST)

001: MAFPDDEKMK GCRPKIFGAK DKKAAKKTDR PSSSAVKSAP SSSKAQSSSP FRPLSAEVRS MREVRSMRLS HFLARSPSVI KIESFRVFIS TWNVGGNTPT
101: AELNLDDFIP ADDHSDIYVL GFQEIVPLNA GNVLVIEDNE PAARWLALIN RTLNRTIDGD ADIFCHKPSL SLDSTSSRSS SNLDASFSNR SGSAIFQSSL
201: KSIRKPYMPT QRKLLKICNC SVEMPRKSYK DACFGCPQAY INETDSSEED EVDDRSNNAS GYVVDGVISS ASASSDQLKY NLVSCKRMVG IFVTVWAKKE
301: LVPHIGHVRT SCVGRGVMGY LGNKGCISVS MTLHQTSFCF ICSHLASGEK EGDELRRNSD VLEILRATQF PRICRRAGQR IPEKIIDHDR VIWLGDLNYR
401: ISLSYEDTKK LLTENNWDAL FQKDQLNTER NSGRVFRGWS EEKIYFAPTY KYTFNSDSYS GETATSKKKR RTPAWCDRIL WHGDGIAQSS YFRGESKFSD
501: HRPVCGSFTV EVYLLDGKSK RRTSNTNIRI GAEELLPTSK NKVTKGAGTK TTK

Best Arabidopsis Sequence Match ( AT5G04980.1 )
(BLAST)

001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.