Factsheet for TraesCS5B01G201300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	93.18	88.99
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	92.71	82.77
Os09t0394600-01	Rice	mitochondrion	70.59	74.81
OQU89459	Sorghum	cytosol	71.29	70.79
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	66.12	69.55
PGSC0003DMT400069298	Potato	cytosol	42.59	55.35
Solyc01g005090.2.1	Tomato	nucleus	43.06	52.44
Solyc06g072390.2.1	Tomato	cytosol	11.76	51.55
PGSC0003DMT400058661	Potato	plastid	30.82	51.37
Solyc03g098030.2.1	Tomato	cytosol	44.71	49.61
AT2G01900.3	Thale cress	mitochondrion	48.24	48.24
KRH48717	Soybean	cytosol	44.24	47.72
Bra026626.1-P	Field mustard	mitochondrion	47.76	47.32
CDY09402	Canola	mitochondrion	47.76	47.32
CDY15795	Canola	mitochondrion	47.76	47.32
KRH58596	Soybean	mitochondrion	47.76	46.67
KRH66073	Soybean	plastid	49.41	46.67
VIT_01s0011g06310.t01	Wine grape	mitochondrion	47.76	46.24
KRG89097	Soybean	cytosol	48.94	46.02
KRH42503	Soybean	cytosol	47.76	45.82
KRH40911	Soybean	cytosol	48.71	45.8
KRH16316	Soybean	cytosol	12.71	45.0
TraesCS4B01G230100.1	Wheat	cytosol	48.47	44.4
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	31.76	42.72
TraesCS5B01G434000.1	Wheat	nucleus	41.18	30.97
TraesCS7B01G086400.2	Wheat	nucleus, plastid	37.88	30.73
TraesCS4B01G017400.1	Wheat	nucleus	40.24	30.32
TraesCS1B01G052100.1	Wheat	plastid	40.47	29.15
TraesCS1B01G316500.1	Wheat	plastid	37.88	29.11
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	39.06	28.42
TraesCS6B01G331500.1	Wheat	nucleus, plastid	39.76	28.17
TraesCS4B01G129000.1	Wheat	nucleus, plastid	37.41	27.65
TraesCS3B01G369700.1	Wheat	nucleus	37.18	24.61
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	33.41	24.36
TraesCS1B01G373800.3	Wheat	cytosol	37.88	24.03
TraesCS3B01G275500.1	Wheat	cytosol	35.53	22.5

Protein Annotations

EnsemblPlants:TraesCS5B01G201300.1	EnsemblPlantsGene:TraesCS5B01G201300	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF63	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:364129558..364131746

Molecular Weight (calculated)

47858.2 Da

IEP (calculated)

8.589

GRAVY (calculated)

-0.338

Length

425 amino acids

Sequence
(BLAST)

001: MPLLDSKTIS SLSIVGYHNM GENRKFGQVS RHAFIILPRM TTNKILHHQE LHGDESISDV SGIVDETLGK SPLDRQDTLK YRVFASTWNI GGIAPTDDLD
101: LEDWLDTRAN SYDIYVLGFQ EIVPLNAVNV LGPSKRCIST KWNSLIGKAL NKKKTRDGAQ LQHTTTNSSA IESFAQEGCF ICIRSKQMVG IFTSVWVRSN
201: LRSYIHHLDV SCVGSGIMGY LGNKGSVSVR FLLHETSFCV VCCHLASGGK QGDVLLRNFD AADILARTRF HGGRNKKLPK KILDHDQVVL LGDLNYRISL
301: EEPETRLLVK AKNWSTLLEN DQLVSEFSTG RLFEGFQEGS VTFSPTYKYQ PNSDQYYWCF EAARGEKKRA PAWCDRILWR GKGLKQIQYG TCDYKLSDHR
401: PVRAGFIAEC RIRGDSEDSI GGFMR

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.