CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40911	Soybean	cytosol	83.78	83.41
KRG89097	Soybean	cytosol	83.33	82.96
KRH42503	Soybean	cytosol	72.44	73.59
KRH58596	Soybean	mitochondrion	71.11	73.56
PGSC0003DMT400058661	Potato	plastid	39.33	69.41
KRH16316	Soybean	cytosol	18.0	67.5
Solyc01g005090.2.1	Tomato	nucleus	50.89	65.62
VIT_01s0011g06310.t01	Wine grape	mitochondrion	60.89	62.41
AT2G01900.3	Thale cress	mitochondrion	58.0	61.41
Bra026626.1-P	Field mustard	mitochondrion	56.67	59.44
CDY09402	Canola	mitochondrion	56.67	59.44
CDY15795	Canola	mitochondrion	56.67	59.44
GSMUA_Achr7P11300_001	Banana	mitochondrion	50.0	56.68
GSMUA_Achr9P15810_001	Banana	cytosol	41.56	55.82
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	44.22	54.37
KRH48717	Soybean	cytosol	46.89	53.55
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	45.56	52.16
Os09t0394600-01	Rice	mitochondrion	46.0	51.62
Zm00001d032253_P003	Maize	cytosol	39.33	51.6
GSMUA_Achr10P...	Banana	mitochondrion	50.0	51.37
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.0	51.24
Zm00001d028366_P001	Maize	cytosol	50.22	49.67
OQU89459	Sorghum	cytosol	47.11	49.53
TraesCS4A01G073900.1	Wheat	cytosol	51.11	49.46
TraesCS5B01G201300.1	Wheat	cytosol	46.67	49.41
TraesCS4B01G230100.1	Wheat	cytosol	50.89	49.35
TraesCS4D01G231500.1	Wheat	cytosol	50.67	49.03
Os03t0238300-01	Rice	cytosol	50.89	46.26
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	45.33	45.84
KXG39809	Sorghum	nucleus	50.44	45.67
EES15004	Sorghum	mitochondrion	40.22	45.36
Os08t0425500-01	Rice	cytosol	40.89	44.44
EES15005	Sorghum	cytosol	40.22	44.25
Zm00001d047972_P001	Maize	mitochondrion	49.78	43.66
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	51.33	43.34
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	45.33	42.86
KRH37570	Soybean	cytosol	10.0	40.18
KRG89576	Soybean	cytosol	9.78	39.29
KRH32792	Soybean	cytosol	21.56	36.6
KRG95832	Soybean	nucleus	37.78	36.17
KRH19738	Soybean	nucleus	36.89	35.55
KRH32331	Soybean	mitochondrion	36.44	35.42
KRH67562	Soybean	nucleus	38.22	34.89
KRH18550	Soybean	cytosol	35.11	34.13
KRG93446	Soybean	cytosol	35.11	33.83
KRH13212	Soybean	nucleus	37.11	33.07
KRH20549	Soybean	nucleus	37.11	32.94
KRH67243	Soybean	nucleus	39.33	31.78
KRH32041	Soybean	nucleus	38.89	31.31
KRG95566	Soybean	nucleus	38.44	30.95
KRH71395	Soybean	nucleus	38.44	30.89
KRH43218	Soybean	nucleus	39.78	30.7
KRH59383	Soybean	nucleus	39.56	30.53
KRH35494	Soybean	nucleus	38.67	29.64
KRG91335	Soybean	nucleus	38.0	29.58
KRH77232	Soybean	cytosol	37.33	29.37
KRH77819	Soybean	nucleus	37.56	29.19
KRH27671	Soybean	nucleus	37.11	28.84
KRH04304	Soybean	cytosol, mitochondrion, nucleus	38.67	27.66
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	53.33	27.55
KRH57586	Soybean	nucleus	38.0	27.4
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	38.0	26.76
KRH28263	Soybean	cytosol	37.33	26.67
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	37.78	26.52
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	36.0	25.67
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	36.0	25.67
KRH04678	Soybean	cytosol	14.89	19.65

Protein Annotations

EntrezGene:100813785	MapMan:27.5.4.1	Gene3D:3.60.10.10	UniProt:A0A0R0KLJ0	EMBL:ACUP02001888	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	EnsemblPlantsGene:GLYMA_03G081200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691
EnsemblPlants:KRH66073	ProteinID:KRH66073	ProteinID:KRH66073.1	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF63
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0006EE034C	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:21874899..21878845

Molecular Weight (calculated)

51218.5 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.300

Length

450 amino acids

Sequence
(BLAST)

001: MIHSPLFSFI TKSSINHYTM TGKLAQFTWP ALVANEILNK RLGSSNFIAD FPSNTEPLLS HDQSSLSSKT MLNDQKDTQK NKIFVSTWNV GGIAPDEGLN
101: MEDLLETRNN SYDIYVLGFQ EIVPLKASNV LGYQNSKIST KWNSIIREAL NKNNTHVLHS FKLDEEGLQG PQDFECIISK QMVGILISVW AKRDLRPFIQ
201: HPSVCCVGCG IMGCLGNKGS VSVRFVLHET SFCFVCGHLA SGGREGDEKH RNSNVAEIFS RTSFPRRGPM LDLPRKILDH EHVILLGDLN YRISLPEETT
301: RLLVENEDWD SLLEYDQLMM ELMRGNMLKG WHEGAIKFAP TYKYCPNSDL YYGCCYHGKK AAKKRAPAWC DRIIWFGNGL KQIQYARCES KLSDHRPVKA
401: LFIAQVRVSS AALRSFQNLF LSERFEQIET PFEVSPTYEF VCKKQSSFRL

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.