Factsheet for HORVU4Hr1G064440.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G230100.1	Wheat	cytosol	85.18	97.84
TraesCS4D01G231500.1	Wheat	cytosol	84.8	97.2
TraesCS4A01G073900.1	Wheat	cytosol	84.62	96.99
Zm00001d028366_P001	Maize	cytosol	66.42	77.8
Os03t0238300-01	Rice	cytosol	69.04	74.34
KXG39809	Sorghum	nucleus	67.35	72.23
Zm00001d047972_P001	Maize	mitochondrion	64.73	67.25
PGSC0003DMT400058661	Potato	plastid	29.27	61.18
GSMUA_Achr7P11300_001	Banana	mitochondrion	44.28	59.45
Solyc01g005090.2.1	Tomato	nucleus	38.46	58.74
GSMUA_Achr10P...	Banana	mitochondrion	46.72	56.85
Solyc06g072390.2.1	Tomato	cytosol	10.32	56.7
Bra026626.1-P	Field mustard	mitochondrion	45.59	56.64
CDY09402	Canola	mitochondrion	45.59	56.64
CDY15795	Canola	mitochondrion	45.03	55.94
AT2G01900.3	Thale cress	mitochondrion	44.47	55.76
VIT_01s0011g06310.t01	Wine grape	mitochondrion	44.65	54.21
PGSC0003DMT400069298	Potato	cytosol	33.02	53.82
KRH58596	Soybean	mitochondrion	43.71	53.56
KRH40911	Soybean	cytosol	44.09	51.99
KRH42503	Soybean	cytosol	43.15	51.92
KRH66073	Soybean	plastid	43.34	51.33
KRG89097	Soybean	cytosol	42.4	50.0
Solyc03g098030.2.1	Tomato	cytosol	35.83	49.87
KRH48717	Soybean	cytosol	34.9	47.21
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	24.39	41.14
KRH16316	Soybean	cytosol	8.44	37.5
HORVU4Hr1G002820.15	Barley	nucleus	34.71	32.69
HORVU5Hr1G104620.10	Barley	nucleus	36.02	32.05
HORVU4Hr1G073350.1	Barley	cytosol, mitochondrion, nucleus	34.52	31.62
HORVU3Hr1G079850.4	Barley	cytosol	34.15	31.27
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	50.66	31.0
HORVU4Hr1G023500.2	Barley	nucleus, plastid	31.71	30.34
HORVU6Hr1G075060.26	Barley	nucleus	32.46	28.41
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	33.77	27.31
HORVU3Hr1G020880.11	Barley	cytosol	31.52	26.58
HORVU3Hr1G067840.2	Barley	cytosol	33.77	25.21
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	32.08	25.07

Protein Annotations

MapMan:27.5.4.1	UniProt:A0A287PE50	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004439	GO:GO:0006629	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0034485	GO:GO:0034595
GO:GO:0046856	GO:GO:0071472	GO:GO:2000369	GO:GO:2000377	EnsemblPlantsGene:HORVU4Hr1G064440	EnsemblPlants:HORVU4Hr1G064440.3
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF141	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI000B464F5C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:540112934..540116226

Molecular Weight (calculated)

59451.5 Da

IEP (calculated)

9.792

GRAVY (calculated)

-0.480

Length

533 amino acids

Sequence
(BLAST)

001: LPSIPLYLVQ PGGPSHSLSY PAGYGALTML ENQSQAEVLW PRLVANKLFR KPSGSHAFVA DFPAVAGAAE EEFDGCSPDA DAQRCVKRAR PQQRNKTLKY
101: RLFASTWNVG GVAPPDDLDL SEWLDTTNGT YDIYVLGFQE VVPLRARNVL GADKNRIGMR WNELVRAALN RSSPSPSPGA TGGGEKQKVH PVRDGAGGLQ
201: SRDFRCVVSK QMVGILLTVW VRGDLRRFVR RPSVSCVGCG VMGCLGNKVR PCVRACLRLH AYRRTCARLG SGRIHRRQLT RDYSNSVQGA VSVRFWLRDT
301: SFCFVCCHLA SGGREGDEAH RNADAAEILR RTSFPRRHCS SSSSPSLASP HKILDHDRVI LLGDLNYRIS LPEAKTRLLV ERHDWKTLLD NDQLRGEVSS
401: EGGTFQGWNE GAITFSPTYK YHRNSDAYYG CAQLGKKGDK LKRRAPAWCD RVLWRGAGLK QTRYDRCESR LSDHRPVRAA FAVEVDAPWN LNSLRSFFLS
501: ERFDDRAKSP AGGLFLLRED DHTTTSARYA EDV

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.