Factsheet for GSMUA_Achr10P17810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P11300_001	Banana	mitochondrion	59.13	65.24
PGSC0003DMT400058661	Potato	plastid	37.67	64.71
GSMUA_Achr9P15810_001	Banana	cytosol	47.26	61.79
Solyc01g005090.2.1	Tomato	nucleus	47.95	60.17
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	49.54	59.29
PGSC0003DMT400069298	Potato	cytosol	44.06	59.02
Solyc06g072390.2.1	Tomato	cytosol	12.79	57.73
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	51.14	57.0
Zm00001d032253_P003	Maize	cytosol	43.84	55.98
VIT_01s0011g06310.t01	Wine grape	mitochondrion	55.02	54.9
TraesCS4A01G073900.1	Wheat	cytosol	57.31	53.98
TraesCS4B01G230100.1	Wheat	cytosol	57.08	53.88
TraesCS4D01G231500.1	Wheat	cytosol	57.08	53.76
Solyc03g098030.2.1	Tomato	cytosol	46.8	53.52
Zm00001d028366_P001	Maize	cytosol	55.25	53.19
KRH58596	Soybean	mitochondrion	52.51	52.87
Os03t0238300-01	Rice	cytosol	58.68	51.92
CDY09402	Canola	mitochondrion	50.0	51.05
Bra026626.1-P	Field mustard	mitochondrion	50.0	51.05
KRH42503	Soybean	cytosol	51.6	51.02
AT2G01900.3	Thale cress	mitochondrion	49.09	50.59
CDY15795	Canola	mitochondrion	49.54	50.58
KRH40911	Soybean	cytosol	51.83	50.22
KRH66073	Soybean	plastid	51.37	50.0
KRH48717	Soybean	cytosol	44.98	50.0
KRG89097	Soybean	cytosol	51.14	49.56
KXG39809	Sorghum	nucleus	56.16	49.5
EES15004	Sorghum	mitochondrion	44.52	48.87
Zm00001d047972_P001	Maize	mitochondrion	56.16	47.95
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	56.85	46.72
EES15005	Sorghum	cytosol	43.61	46.7
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	33.1	45.89
Os08t0425500-01	Rice	cytosol	43.15	45.65
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	40.18	44.67
GSMUA_Achr2P08860_001	Banana	cytosol	38.36	38.98
GSMUA_Achr4P21240_001	Banana	cytosol	40.87	37.76
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	73.97	37.2
GSMUA_Achr5P02940_001	Banana	nucleus	41.32	37.09
GSMUA_Achr7P01420_001	Banana	nucleus	41.55	36.77
KRH16316	Soybean	cytosol	10.05	36.67
GSMUA_Achr9P12980_001	Banana	nucleus	42.01	36.51
GSMUA_Achr7P17700_001	Banana	nucleus	41.55	35.83
GSMUA_Achr9P23430_001	Banana	mitochondrion	38.13	35.53
GSMUA_Achr7P25790_001	Banana	nucleus	40.41	34.98
GSMUA_Achr7P07740_001	Banana	cytosol	39.95	34.59
GSMUA_Achr2P17460_001	Banana	nucleus	40.18	34.24
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	39.27	33.99
GSMUA_Achr3P14960_001	Banana	nucleus	40.64	33.65
GSMUA_Achr3P27520_001	Banana	mitochondrion	38.13	33.2
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	39.27	33.08
GSMUA_Achr7P13350_001	Banana	mitochondrion	39.27	31.39
GSMUA_AchrUn_...	Banana	nucleus	40.41	30.52
GSMUA_Achr5P16700_001	Banana	cytosol	29.22	30.48
GSMUA_Achr5P28560_001	Banana	nucleus	37.9	30.4
GSMUA_Achr8P02080_001	Banana	mitochondrion	38.81	30.09
GSMUA_Achr6P15360_001	Banana	nucleus	37.44	27.33
GSMUA_Achr10P...	Banana	cytosol	39.27	25.67

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856
EnsemblPlantsGene:GSMUA_Achr10G17810_001	EnsemblPlants:GSMUA_Achr10P17810_001	EnsemblPlants:GSMUA_Achr10T17810_001	InterPro:IPPc	InterPro:IPR036691	UniProt:M0RJ56
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF63	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002965B35
SEG:seg	:	:	:	:	:

Description

endonuclease/exonuclease/phosphatase family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G17810_001]

Coordinates

chr10:-:24849585..24851451

Molecular Weight (calculated)

50234.1 Da

IEP (calculated)

8.839

GRAVY (calculated)

-0.526

Length

438 amino acids

Sequence
(BLAST)

001: MFSARTKRLT FMQVMWLKSV ANKLLRKPVG TDALLEGATF DEFINPNEPQ KDQIDTRKYK LFVSTWNVGG VLPSDDVNLE DWLDVNNKYY DIYVLGFQEI
101: VPLNVKNVLC PERRRILASW NSLIGRTLNR SLSNLKGRKE AKAGERQKVH PVKEGSSDEG SAPDFRCIIS KRMVGVQVSV WVRHDLQHHI RHPGVSRVGC
201: GIMGCLGNKG SVSVRFWLHE TSFCFVCCHL ASGGKEGDEL KRNSDAMEIL SRTSFPGGPP LHLPQKILDH DRVILLGDLN YRISLPETTT RSLVEQKRWS
301: MLLEKDQLKA EVTDGRVFED WQEGAIAFCP TYKYYPDSDK YYGCMPGRKG EKRRAPAWCD RILWHGEGMK QKRYDRCESR LSDHRPVRAV FAVDVDVRRS
401: WNSLGSFFSS ERFHLPTEQS QLLMDDEHTS EGRTSIHI

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.