CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58596	Soybean	mitochondrion	93.0	94.71
KRH40911	Soybean	cytosol	74.94	73.45
KRG89097	Soybean	cytosol	74.94	73.45
KRH66073	Soybean	plastid	73.59	72.44
PGSC0003DMT400058661	Potato	plastid	39.73	69.02
Solyc01g005090.2.1	Tomato	nucleus	53.05	67.34
KRH16316	Soybean	cytosol	17.61	65.0
VIT_01s0011g06310.t01	Wine grape	mitochondrion	62.75	63.33
AT2G01900.3	Thale cress	mitochondrion	58.24	60.71
CDY15795	Canola	mitochondrion	56.88	58.74
Bra026626.1-P	Field mustard	mitochondrion	56.66	58.51
CDY09402	Canola	mitochondrion	56.66	58.51
GSMUA_Achr9P15810_001	Banana	cytosol	42.44	56.12
GSMUA_Achr7P11300_001	Banana	mitochondrion	48.98	54.66
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	45.15	54.64
KRH48717	Soybean	cytosol	47.63	53.55
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	46.28	52.16
GSMUA_Achr10P...	Banana	mitochondrion	51.02	51.6
Zm00001d032253_P003	Maize	cytosol	39.28	50.73
Os09t0394600-01	Rice	mitochondrion	45.82	50.62
TraesCS4B01G230100.1	Wheat	cytosol	51.92	49.57
TraesCS4D01G231500.1	Wheat	cytosol	51.69	49.25
TraesCS4A01G073900.1	Wheat	cytosol	51.69	49.25
Zm00001d028366_P001	Maize	cytosol	50.34	49.01
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	44.7	49.01
TraesCS5B01G201300.1	Wheat	cytosol	45.82	47.76
OQU89459	Sorghum	cytosol	45.6	47.2
Os03t0238300-01	Rice	cytosol	51.69	46.26
KXG39809	Sorghum	nucleus	51.02	45.47
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	44.47	44.27
EES15004	Sorghum	mitochondrion	39.73	44.11
Zm00001d047972_P001	Maize	mitochondrion	50.79	43.86
EES15005	Sorghum	cytosol	39.95	43.28
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	51.92	43.15
Os08t0425500-01	Rice	cytosol	39.5	42.27
KRH37570	Soybean	cytosol	10.61	41.96
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	44.47	41.39
KRG89576	Soybean	cytosol	10.38	41.07
KRH32792	Soybean	cytosol	23.7	39.62
KRG95832	Soybean	nucleus	38.37	36.17
KRH19738	Soybean	nucleus	37.47	35.55
KRH32331	Soybean	mitochondrion	37.02	35.42
KRH13212	Soybean	nucleus	39.05	34.26
KRH20549	Soybean	nucleus	39.05	34.12
KRH67562	Soybean	nucleus	37.92	34.08
KRH18550	Soybean	cytosol	35.44	33.91
KRG93446	Soybean	cytosol	35.44	33.62
KRH67243	Soybean	nucleus	41.76	33.21
KRH32041	Soybean	nucleus	41.53	32.92
KRH71395	Soybean	nucleus	41.08	32.5
KRG95566	Soybean	nucleus	40.86	32.38
KRH77819	Soybean	nucleus	41.99	32.12
KRH27671	Soybean	nucleus	41.76	31.95
KRH35494	Soybean	nucleus	42.21	31.86
KRG91335	Soybean	nucleus	41.53	31.83
KRH77232	Soybean	cytosol	40.18	31.12
KRH43218	Soybean	nucleus	40.86	31.05
KRH59383	Soybean	nucleus	40.63	30.87
KRH57586	Soybean	nucleus	40.63	28.85
KRH04304	Soybean	cytosol, mitochondrion, nucleus	40.63	28.62
KRH28263	Soybean	cytosol	39.95	28.1
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	53.5	27.21
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	39.05	27.07
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	38.83	26.83
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	37.25	26.15
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	37.02	25.99
KRH04678	Soybean	cytosol	16.7	21.7

Protein Annotations

EntrezGene:100793120	MapMan:27.5.4.1	Gene3D:3.60.10.10	UniProt:A0A0R0IJF7	EMBL:ACUP02004805	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	EnsemblPlantsGene:GLYMA_08G093200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691
EnsemblPlants:KRH42503	ProteinID:KRH42503	ProteinID:KRH42503.1	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF63
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0006EE01FD	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:7057550..7060708

Molecular Weight (calculated)

50938.2 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.410

Length

443 amino acids

Sequence
(BLAST)

001: MWPTLVANKI FKKRLGSSNF IADYPSYKEP LLGIVDIDQN SKTILNDHKD SHKYKVFVST WNVGGIAPDE DLNIDDLLET CNNSCDIYIL GYCQNYFRFQ
101: EIVPLKASNV LGSENNEISM KWNSIIREAL NKKITHQRDK DAKKQELKNN FPNKKENPAK CCDAPHDFQC IISKQMVGLF ISVWIRRDLC PFIRHPSVSC
201: VGCGIMGCLG NKGSISVRFQ LHETSFCFVC SHLASGGREG DEKHRNSNVA EIFSRTSFPR GPLLDLPRTI LDHDHVILLG DLNYRISLPE ETTRLLVEKR
301: DWDSLLANDQ LIMELMSGNM LRGWHEGAIK FAPTYKYCPN SDIYYGCCYH GKKAEKRRAP AWCDRIVWCG EGLKQLQYTT IESKLSDHRP VKAMFIAEVR
401: VLPELMKNLQ SLFLSERYEQ IKTPFEVSTT EDFVNRKRSS FRL

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.