Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020378_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 73.32 | 72.77 |
| OQU89459 | Sorghum | cytosol | 77.06 | 72.2 |
| TraesCS5B01G201300.1 | Wheat | cytosol | 74.81 | 70.59 |
| TraesCS5A01G202800.2 | Wheat | endoplasmic reticulum, vacuole | 72.57 | 65.39 |
| TraesCS5D01G209200.2 | Wheat | cytosol, peroxisome, plasma membrane | 72.32 | 60.92 |
| PGSC0003DMT400069298 | Potato | cytosol | 46.13 | 56.57 |
| Solyc06g072390.2.1 | Tomato | cytosol | 13.47 | 55.67 |
| Os08t0425500-01 | Rice | cytosol | 56.36 | 54.59 |
| Solyc01g005090.2.1 | Tomato | nucleus | 45.39 | 52.15 |
| PGSC0003DMT400058661 | Potato | plastid | 32.92 | 51.76 |
| Solyc03g098030.2.1 | Tomato | cytosol | 46.63 | 48.83 |
| AT2G01900.3 | Thale cress | mitochondrion | 50.62 | 47.76 |
| VIT_01s0011g06310.t01 | Wine grape | mitochondrion | 52.12 | 47.61 |
| KRH58596 | Soybean | mitochondrion | 51.12 | 47.13 |
| KRH48717 | Soybean | cytosol | 46.13 | 46.95 |
| Bra026626.1-P | Field mustard | mitochondrion | 49.38 | 46.15 |
| CDY09402 | Canola | mitochondrion | 49.38 | 46.15 |
| CDY15795 | Canola | mitochondrion | 49.38 | 46.15 |
| KRH40911 | Soybean | cytosol | 51.87 | 46.02 |
| KRH66073 | Soybean | plastid | 51.62 | 46.0 |
| KRH42503 | Soybean | cytosol | 50.62 | 45.82 |
| KRG89097 | Soybean | cytosol | 50.62 | 44.91 |
| KRH16316 | Soybean | cytosol | 12.97 | 43.33 |
| Os03t0238300-01 | Rice | cytosol | 51.62 | 41.82 |
| Solyc06g072400.1.1 | Tomato | extracellular, plasma membrane, vacuole | 32.92 | 41.77 |
| Os05t0114100-00 | Rice | cytosol, nucleus | 39.4 | 36.41 |
| Os06t0222900-01 | Rice | nucleus | 43.39 | 32.65 |
| Os03t0793600-00 | Rice | nucleus | 44.39 | 31.5 |
| Os07t0175900-01 | Rice | cytosol | 43.64 | 30.7 |
| Os02t0751900-01 | Rice | plasma membrane | 42.39 | 30.04 |
| Os03t0160600-01 | Rice | mitochondrion | 42.64 | 29.69 |
| Os05t0489000-01 | Rice | nucleus | 39.65 | 28.8 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 41.9 | 28.47 |
| Os01t0716800-01 | Rice | plastid | 41.15 | 24.41 |
| Os01t0183300-01 | Rice | cytosol | 36.41 | 23.9 |
| Os01t0814200-01 | Rice | cytosol, nucleus, peroxisome | 15.71 | 22.74 |
| Os05t0535600-00 | Rice | cytosol, mitochondrion | 17.21 | 18.85 |
| Os03t0663700-01 | Rice | nucleus | 10.97 | 15.12 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | EntrezGene:4346970 | ProteinID:BAD26446.1 | ProteinID:BAD26496.1 | ProteinID:BAF25008.1 |
| ProteinID:BAT07926.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc |
| InterPro:IPR036691 | EnsemblPlantsGene:Os09g0394600 | EnsemblPlants:Os09t0394600-01 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF63 |
| UniProt:Q6H453 | SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI00003B46F6 | RefSeq:XP_015651238.1 | : |
Description
Endonuclease/exonuclease/phosphatase domain containing protein. (Os09t0394600-01)
Coordinates
chr9:-:13688245..13690936
Molecular Weight (calculated)
45375.2 Da
IEP (calculated)
7.821
GRAVY (calculated)
-0.308
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEKHIILPR LVPSKLSHRQ QLCGHRSVSE ISGVVDETLG KRPLDGQNDI LRYRVFTSTW NVGGMTPSSD LDLEDWMDST ANSYDIYVLG FQEIVPLNAR
101: NVLGPRNSCI STKWNSLIGE ALNKRRRRGA VLHQEITNSS ATERSAQEEH FRCIMNKQMV GIFMSVWVRS NLRPYIHHLN VSCVGSGIMG YLGNKGSVSI
201: RFVLHETSFC FVCCHLASGG KQGDVLLRNF DAADILVRTR FPGGATQELP KKILDHDQVV LLGDLNYRIS LEEAETRLLV EDKNWSILLE NDQLLIEFST
301: GRHFDGWQEG LITFSPTYKY HPNSDQYYWC FDGALGKKKR APAWCDRILW RGKGLKQIQY DTCNYRLSDH RPVRAVFHAE CVIRGDADCA CGCIALSSSS
401: E
101: NVLGPRNSCI STKWNSLIGE ALNKRRRRGA VLHQEITNSS ATERSAQEEH FRCIMNKQMV GIFMSVWVRS NLRPYIHHLN VSCVGSGIMG YLGNKGSVSI
201: RFVLHETSFC FVCCHLASGG KQGDVLLRNF DAADILVRTR FPGGATQELP KKILDHDQVV LLGDLNYRIS LEEAETRLLV EDKNWSILLE NDQLLIEFST
301: GRHFDGWQEG LITFSPTYKY HPNSDQYYWC FDGALGKKKR APAWCDRILW RGKGLKQIQY DTCNYRLSDH RPVRAVFHAE CVIRGDADCA CGCIALSSSS
401: E
001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST
Arabidopsis Description
DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.