Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069298 | Potato | cytosol | 55.7 | 53.82 |
| Solyc03g098030.2.1 | Tomato | cytosol | 54.11 | 44.65 |
| GSMUA_Achr9P15810_001 | Banana | cytosol | 40.19 | 37.91 |
| Zm00001d032253_P003 | Maize | cytosol | 38.61 | 35.57 |
| Solyc01g005090.2.1 | Tomato | nucleus | 39.24 | 35.53 |
| GSMUA_Achr3P07600_001 | Banana | golgi, plasma membrane | 40.82 | 35.25 |
| GSMUA_Achr7P02400_001 | Banana | endoplasmic reticulum, golgi, plastid | 42.72 | 34.35 |
| KRH48717 | Soybean | cytosol | 41.77 | 33.5 |
| GSMUA_Achr7P11300_001 | Banana | mitochondrion | 41.77 | 33.25 |
| GSMUA_Achr10P... | Banana | mitochondrion | 45.89 | 33.1 |
| Os09t0394600-01 | Rice | mitochondrion | 41.77 | 32.92 |
| Zm00001d020378_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 41.14 | 32.18 |
| TraesCS5B01G201300.1 | Wheat | cytosol | 42.72 | 31.76 |
| OQU89459 | Sorghum | cytosol | 41.77 | 30.84 |
| TraesCS5A01G202800.2 | Wheat | endoplasmic reticulum, vacuole | 42.41 | 30.11 |
| EES15005 | Sorghum | cytosol | 38.61 | 29.83 |
| EES15004 | Sorghum | mitochondrion | 37.34 | 29.57 |
| Os08t0425500-01 | Rice | cytosol | 37.97 | 28.99 |
| TraesCS4A01G073900.1 | Wheat | cytosol | 41.46 | 28.17 |
| TraesCS5D01G209200.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.41 | 28.15 |
| TraesCS4B01G230100.1 | Wheat | cytosol | 41.14 | 28.02 |
| TraesCS4D01G231500.1 | Wheat | cytosol | 41.14 | 27.96 |
| Zm00001d028366_P001 | Maize | cytosol | 38.92 | 27.03 |
| Os03t0238300-01 | Rice | cytosol | 41.46 | 26.46 |
| KXG39809 | Sorghum | nucleus | 39.87 | 25.35 |
| Zm00001d047972_P001 | Maize | mitochondrion | 39.87 | 24.56 |
| HORVU4Hr1G064440.3 | Barley | cytosol, nucleus | 41.14 | 24.39 |
| Solyc09g005690.2.1 | Tomato | cytosol | 32.28 | 24.11 |
| Solyc02g087430.2.1 | Tomato | mitochondrion, nucleus | 33.23 | 22.98 |
| Solyc09g065480.1.1 | Tomato | nucleus | 34.81 | 19.64 |
| Solyc04g054830.2.1 | Tomato | nucleus | 34.49 | 19.53 |
| Solyc06g054010.2.1 | Tomato | nucleus | 34.49 | 18.38 |
| Solyc09g082370.2.1 | Tomato | nucleus | 35.13 | 17.79 |
| Solyc08g077210.2.1 | Tomato | mitochondrion | 32.28 | 16.19 |
| GSMUA_Achr6P11400_001 | Banana | cytosol, nucleus, peroxisome | 43.99 | 15.96 |
| Solyc08g007080.2.1 | Tomato | cytosol, mitochondrion, nucleus | 30.06 | 15.35 |
| Solyc06g072390.2.1 | Tomato | cytosol | 3.48 | 11.34 |
Protein Annotations
| EnsemblPlants:Solyc06g072400.1.1 | EnsemblPlantsGene:Solyc06g072400.1 | Gene3D:3.60.10.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | InterPro:Endo/exonu/phosph_ase_sf |
| InterPro:IPPc | InterPro:IPR036691 | ncoils:Coil | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF190 | SEG:seg |
| SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI0002765797 | UniProt:K4C8W0 | MapMan:50.3.1 | : |
Description
No Description!
Coordinates
chr6:-:44663868..44665891
Molecular Weight (calculated)
35637.1 Da
IEP (calculated)
8.085
GRAVY (calculated)
-0.063
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSAYMMMLF VSSWNVGGIA PPNDLNMEEL LDTRNNLADI YVLGAGWGKY LTWQGREALT QGRFQEIVPL NAGSVIVPEN TTICMQWNSL ISTALNKLDV
101: NNITLQEAEE EESVKVYPLK KGSSLKFNVE NSTQFECIIS KQMVGIFITV WARSPLLPYI SHTSVSCVGC GIFGYLGNKG SVSVRFWLHE TSFCFVCSHL
201: ASGGKEGDEK QRNADATQIL SRTRFSCDSF QYLPRKILQH EYVYLLTIIL LTISHQKKNI QRLEFPHPRN FVKVTVVDSC YRTSCQSDDN RVNSLIMLPK
301: VKKPALLFCS KTIAAD
101: NNITLQEAEE EESVKVYPLK KGSSLKFNVE NSTQFECIIS KQMVGIFITV WARSPLLPYI SHTSVSCVGC GIFGYLGNKG SVSVRFWLHE TSFCFVCSHL
201: ASGGKEGDEK QRNADATQIL SRTRFSCDSF QYLPRKILQH EYVYLLTIIL LTISHQKKNI QRLEFPHPRN FVKVTVVDSC YRTSCQSDDN RVNSLIMLPK
301: VKKPALLFCS KTIAAD
001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST
Arabidopsis Description
DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.