Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G201300.1 | Wheat | cytosol | 88.99 | 93.18 |
| TraesCS5D01G209200.2 | Wheat | cytosol, peroxisome, plasma membrane | 98.2 | 91.81 |
| Os09t0394600-01 | Rice | mitochondrion | 65.39 | 72.57 |
| OQU89459 | Sorghum | cytosol | 66.52 | 69.16 |
| Zm00001d020378_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 61.57 | 67.82 |
| PGSC0003DMT400069298 | Potato | cytosol | 39.33 | 53.52 |
| Solyc01g005090.2.1 | Tomato | nucleus | 39.78 | 50.72 |
| PGSC0003DMT400058661 | Potato | plastid | 27.87 | 48.63 |
| Solyc03g098030.2.1 | Tomato | cytosol | 40.67 | 47.26 |
| AT2G01900.3 | Thale cress | mitochondrion | 44.49 | 46.59 |
| Solyc06g072390.2.1 | Tomato | cytosol | 10.11 | 46.39 |
| KRH48717 | Soybean | cytosol | 40.9 | 46.19 |
| Bra026626.1-P | Field mustard | mitochondrion | 43.82 | 45.45 |
| CDY09402 | Canola | mitochondrion | 43.82 | 45.45 |
| CDY15795 | Canola | mitochondrion | 43.82 | 45.45 |
| KRH66073 | Soybean | plastid | 45.84 | 45.33 |
| VIT_01s0011g06310.t01 | Wine grape | mitochondrion | 44.72 | 45.33 |
| KRH58596 | Soybean | mitochondrion | 44.04 | 45.06 |
| KRH16316 | Soybean | cytosol | 12.13 | 45.0 |
| KRH40911 | Soybean | cytosol | 45.39 | 44.69 |
| KRG89097 | Soybean | cytosol | 45.39 | 44.69 |
| KRH42503 | Soybean | cytosol | 44.27 | 44.47 |
| TraesCS4A01G073900.1 | Wheat | cytosol | 45.17 | 43.23 |
| Solyc06g072400.1.1 | Tomato | extracellular, plasma membrane, vacuole | 30.11 | 42.41 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 37.98 | 29.91 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 36.63 | 28.9 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 36.63 | 28.4 |
| TraesCS1A01G039300.1 | Wheat | plastid | 37.53 | 28.11 |
| TraesCS1A01G305800.2 | Wheat | plastid | 34.83 | 28.03 |
| TraesCS4A01G189600.1 | Wheat | plastid | 34.83 | 27.68 |
| TraesCS7A01G181500.1 | Wheat | nucleus, plastid | 30.56 | 27.47 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 35.73 | 27.27 |
| TraesCS6A01G302300.1 | Wheat | nucleus, plastid | 36.4 | 27.14 |
| TraesCS3A01G338100.1 | Wheat | nucleus, plastid | 33.93 | 25.99 |
| TraesCS1A01G357300.2 | Wheat | cytosol | 34.16 | 23.97 |
| TraesCS3A01G114900.1 | Wheat | cytosol | 30.34 | 23.0 |
| TraesCS3A01G244500.1 | Wheat | cytosol | 32.58 | 21.58 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G202800.2 | EnsemblPlantsGene:TraesCS5A01G202800 | Gene3D:3.60.10.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0046856 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPPc | InterPro:IPR036691 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF63 | PFAM:PF03372 | SEG:seg | SMART:SM00128 | SUPFAM:SSF56219 |
| TMHMM:TMhelix | MapMan:27.5.4.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:410501745..410504047
Molecular Weight (calculated)
49856.0 Da
IEP (calculated)
8.621
GRAVY (calculated)
-0.178
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLLTCNSV NILATAFSLF FPAHLLSYIF AAFAVFMITC CMPLLDSKTI SSLSIVGYHN MGENRKFGQI ILPRMTTNKI LHHQELHGDQ SISDVSGIVD
101: ETLGKSPLDR QGTLKYRVFA STWNIGGVAP TDDLDLEDWL DTRANSYDIY VLGFQEIVPL NAVNVLGPSK RCISTKWNSL IGKALNKKKT RDGAQLQHTT
201: TNSSAMESFA QEGCFICIRS KQMVGIFTSV WVRSNLRSYI HHLDVSCVGS GIMGYLGNKG SVSVRFLLHE TSFCVVCCHL ASGGKQGDVL LRNFDAADIL
301: ARTRFHGGGH KKLPKKILDH DQVVLLGDLN YRISLEEPET RLLVKAKNWS TLLENDQEGP VTFSPTYKYQ PNSDQYYWCF EAARGEKKRA PAWCDRILWR
401: GKGLKQIQYG TCDYKLSDHR PVRAGFIAEC RIRGDAEDSI GGFMR
101: ETLGKSPLDR QGTLKYRVFA STWNIGGVAP TDDLDLEDWL DTRANSYDIY VLGFQEIVPL NAVNVLGPSK RCISTKWNSL IGKALNKKKT RDGAQLQHTT
201: TNSSAMESFA QEGCFICIRS KQMVGIFTSV WVRSNLRSYI HHLDVSCVGS GIMGYLGNKG SVSVRFLLHE TSFCVVCCHL ASGGKQGDVL LRNFDAADIL
301: ARTRFHGGGH KKLPKKILDH DQVVLLGDLN YRISLEEPET RLLVKAKNWS TLLENDQEGP VTFSPTYKYQ PNSDQYYWCF EAARGEKKRA PAWCDRILWR
401: GKGLKQIQYG TCDYKLSDHR PVRAGFIAEC RIRGDAEDSI GGFMR
001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST
Arabidopsis Description
DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.