CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42503	Soybean	cytosol	94.71	93.0
KRH40911	Soybean	cytosol	75.17	72.35
KRG89097	Soybean	cytosol	74.71	71.9
KRH66073	Soybean	plastid	73.56	71.11
PGSC0003DMT400058661	Potato	plastid	41.15	70.2
Solyc01g005090.2.1	Tomato	nucleus	54.25	67.62
VIT_01s0011g06310.t01	Wine grape	mitochondrion	63.45	62.87
KRH16316	Soybean	cytosol	17.01	61.67
AT2G01900.3	Thale cress	mitochondrion	60.23	61.65
CDY15795	Canola	mitochondrion	58.85	59.67
Bra026626.1-P	Field mustard	mitochondrion	58.62	59.44
CDY09402	Canola	mitochondrion	58.62	59.44
GSMUA_Achr9P15810_001	Banana	cytosol	43.45	56.42
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	46.44	55.19
GSMUA_Achr7P11300_001	Banana	mitochondrion	49.66	54.41
KRH48717	Soybean	cytosol	48.05	53.05
GSMUA_Achr10P...	Banana	mitochondrion	52.87	52.51
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	47.13	52.16
Os09t0394600-01	Rice	mitochondrion	47.13	51.12
Zm00001d032253_P003	Maize	cytosol	39.77	50.44
TraesCS4B01G230100.1	Wheat	cytosol	53.56	50.22
TraesCS4D01G231500.1	Wheat	cytosol	53.33	49.89
TraesCS4A01G073900.1	Wheat	cytosol	53.33	49.89
Zm00001d028366_P001	Maize	cytosol	52.18	49.89
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	45.75	49.26
TraesCS5B01G201300.1	Wheat	cytosol	46.67	47.76
OQU89459	Sorghum	cytosol	46.9	47.66
Os03t0238300-01	Rice	cytosol	53.33	46.87
KXG39809	Sorghum	nucleus	52.87	46.28
Zm00001d047972_P001	Maize	mitochondrion	52.64	44.64
EES15004	Sorghum	mitochondrion	40.46	44.11
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	45.06	44.04
KRH37570	Soybean	cytosol	11.26	43.75
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	53.56	43.71
EES15005	Sorghum	cytosol	40.92	43.52
Os08t0425500-01	Rice	cytosol	40.92	43.0
KRG89576	Soybean	cytosol	10.8	41.96
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	45.06	41.18
KRH32792	Soybean	cytosol	24.6	40.38
KRG95832	Soybean	nucleus	39.77	36.81
KRH19738	Soybean	nucleus	38.39	35.76
KRH32331	Soybean	mitochondrion	37.93	35.64
KRH67562	Soybean	nucleus	39.31	34.69
KRH18550	Soybean	cytosol	36.32	34.13
KRH67243	Soybean	nucleus	43.45	33.93
KRH13212	Soybean	nucleus	39.31	33.86
KRG93446	Soybean	cytosol	36.32	33.83
KRH20549	Soybean	nucleus	39.31	33.73
KRH32041	Soybean	nucleus	43.22	33.63
KRH71395	Soybean	nucleus	42.76	33.21
KRG95566	Soybean	nucleus	42.53	33.09
KRH77819	Soybean	nucleus	43.45	32.64
KRH27671	Soybean	nucleus	43.22	32.47
KRH35494	Soybean	nucleus	43.68	32.37
KRG91335	Soybean	nucleus	42.99	32.35
KRH77232	Soybean	cytosol	41.15	31.29
KRH43218	Soybean	nucleus	40.92	30.53
KRH59383	Soybean	nucleus	40.69	30.36
KRH57586	Soybean	nucleus	41.61	29.01
KRH04304	Soybean	cytosol, mitochondrion, nucleus	41.61	28.78
KRH28263	Soybean	cytosol	40.92	28.25
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	54.94	27.44
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	39.77	27.07
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	39.54	26.83
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	37.93	26.15
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	37.7	25.99
KRH04678	Soybean	cytosol	17.01	21.7

Protein Annotations

EntrezGene:100818069	MapMan:27.5.4.1	Gene3D:3.60.10.10	EMBL:ACUP02003274	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
EnsemblPlantsGene:GLYMA_05G138100	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	UniProt:I1K3C3	InterPro:IPPc	InterPro:IPR036691
EnsemblPlants:KRH58596	ProteinID:KRH58596	ProteinID:KRH58596.1	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF63
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI00023393DF	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:33054280..33058277

Molecular Weight (calculated)

50011.2 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.428

Length

435 amino acids

Sequence
(BLAST)

001: MWPTLVANKI FKKRLGSSNF IADFPSYKEP LLGIVDIDQN SKTILNDHKD THKYKVFVST WNVGGIAPDE DLNIDDLFET FNNSCDIYIL GFQEIVPLRA
101: SNVLGSENNE ISMKWNSKIR EALNKKTHQR GKDAKKQELK KNFPNKKENP AKCCEAPHDF QCIISKQMVG LFISVWIRRD LCPFIRHPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETSFCF VCSHLASGGS EGDEKYRNSN VAEIFSRTSF PRGPLLDLPR TILDHDHVIF LGDLNYRISL PEETTRLLVE KRDWDSLLEN
301: DQLIMELMTG NMLRGWNEGA IKFGPTYKYC PNSDIYYGCC YHGKKAEKRR APAWCDRIVW YGEGLKQLQY TRIESKLSDH RPVKAMFMAE VMVLPELMKN
401: LQSLFLSERY EQIKTPLEVS TTDDFVNRKR SSFRL

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.