Factsheet for TraesCS4A01G073900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G231500.1	Wheat	cytosol	98.06	98.06
TraesCS4B01G230100.1	Wheat	cytosol	97.63	97.84
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	96.99	84.62
Zm00001d028366_P001	Maize	cytosol	76.56	78.24
Os03t0238300-01	Rice	cytosol	80.43	75.56
KXG39809	Sorghum	nucleus	78.49	73.44
Zm00001d047972_P001	Maize	mitochondrion	75.05	68.03
PGSC0003DMT400058661	Potato	plastid	33.55	61.18
GSMUA_Achr7P11300_001	Banana	mitochondrion	50.97	59.7
Solyc01g005090.2.1	Tomato	nucleus	44.3	59.03
GSMUA_Achr10P...	Banana	mitochondrion	53.98	57.31
Bra026626.1-P	Field mustard	mitochondrion	52.47	56.88
CDY09402	Canola	mitochondrion	52.47	56.88
CDY15795	Canola	mitochondrion	51.83	56.18
AT2G01900.3	Thale cress	mitochondrion	51.18	56.0
Solyc06g072390.2.1	Tomato	cytosol	11.61	55.67
VIT_01s0011g06310.t01	Wine grape	mitochondrion	51.4	54.44
PGSC0003DMT400069298	Potato	cytosol	38.06	54.13
KRH58596	Soybean	mitochondrion	49.89	53.33
KRH40911	Soybean	cytosol	50.75	52.21
KRH42503	Soybean	cytosol	49.25	51.69
KRH66073	Soybean	plastid	49.46	51.11
KRG89097	Soybean	cytosol	48.82	50.22
Solyc03g098030.2.1	Tomato	cytosol	40.86	49.61
KRH48717	Soybean	cytosol	39.78	46.95
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	43.23	45.17
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	28.17	41.46
KRH16316	Soybean	cytosol	9.89	38.33
TraesCS5A01G432000.1	Wheat	nucleus	41.51	34.16
TraesCS4A01G296200.1	Wheat	nucleus	40.43	33.33
TraesCS6A01G225700.2	Wheat	nucleus	40.43	32.75
TraesCS1A01G305800.2	Wheat	plastid	38.71	32.55
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	40.22	32.08
TraesCS4A01G189600.1	Wheat	plastid	37.42	31.07
TraesCS7A01G181500.1	Wheat	nucleus, plastid	32.9	30.91
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	57.85	30.88
TraesCS3A01G338100.1	Wheat	nucleus, plastid	38.49	30.81
TraesCS1A01G039300.1	Wheat	plastid	38.49	30.13
TraesCS6A01G302300.1	Wheat	nucleus, plastid	38.49	29.98
TraesCS3A01G114900.1	Wheat	cytosol	36.77	29.13
TraesCS1A01G357300.2	Wheat	cytosol	37.63	27.6
TraesCS3A01G244500.1	Wheat	cytosol	39.35	27.23

Protein Annotations

EnsemblPlants:TraesCS4A01G073900.1	EnsemblPlantsGene:TraesCS4A01G073900	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF141	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:73136858..73140444

Molecular Weight (calculated)

52014.5 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.527

Length

465 amino acids

Sequence
(BLAST)

001: MLENQSQAEV LWPRLVANKL FRKPSGSHAF VADFPAAAGA AEEEFDACGS PDADAQRCVK RPRPQQRNKT LKYRLFASTW NVGGVAPPDD LDLSDWLDTR
101: NGTYDIYVLG FQEVVPLRAR NVLGADKNRI GMRWNELVRA ALNRSSPSPS PGATGGGEKQ KVHPVRDGAG GLQSRDFRCV VSKQMVGILL TVWVRGDLRR
201: FVRRPSVSCV GCGVMGCLGN KGAVSVRFWL RDTSFCFVCC HLASGGREGD EAHRNADAAE ILRRTSFPRR HCSSSSPSLA SPHKILDHDR VILLGDLNYR
301: ISLPEAKTRL LVERHDWKTL LENDQLRGEV SSEGGTFKGW SEGAITFSPT YKYHRNSDAY YGCAQLGRKG DKLKRRAPAW CDRVLWRGAG LRQTRYDRCE
401: SRLSDHRPVR AAFSVEVDAP WNLNSLRSFF LSERFDDRAK GPADGLFLLR EDDHTTTSAR YAEDV

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.