Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G123400.1 | Wheat | plastid | 97.32 | 97.32 |
| HORVU4Hr1G023500.2 | Barley | nucleus, plastid | 95.54 | 96.05 |
| TraesCS4B01G129000.1 | Wheat | nucleus, plastid | 96.79 | 94.26 |
| KXG27642 | Sorghum | plastid | 71.96 | 71.08 |
| Zm00001d052401_P001 | Maize | cytosol, nucleus, plastid | 57.68 | 69.02 |
| PGSC0003DMT400053156 | Potato | mitochondrion | 42.68 | 51.51 |
| TraesCS1A01G305800.2 | Wheat | plastid | 49.64 | 50.27 |
| VIT_00s0556g00010.t01 | Wine grape | golgi, vacuole | 39.64 | 49.89 |
| Bra031881.1-P | Field mustard | cytosol | 40.71 | 49.03 |
| CDY33984 | Canola | nucleus | 40.54 | 47.99 |
| GSMUA_Achr9P12980_001 | Banana | nucleus | 42.68 | 47.42 |
| TraesCS3A01G338100.1 | Wheat | nucleus, plastid | 48.57 | 46.82 |
| VIT_00s0357g00110.t01 | Wine grape | golgi | 38.75 | 46.57 |
| GSMUA_Achr7P17700_001 | Banana | nucleus | 42.14 | 46.46 |
| KRH43218 | Soybean | nucleus | 46.79 | 44.94 |
| KRH59383 | Soybean | nucleus | 46.79 | 44.94 |
| AT5G65090.1 | Thale cress | nucleus | 42.32 | 44.8 |
| Solyc04g054830.2.1 | Tomato | nucleus | 43.75 | 43.91 |
| CDY31285 | Canola | nucleus | 42.5 | 43.12 |
| TraesCS7A01G181500.1 | Wheat | nucleus, plastid | 37.68 | 42.63 |
| TraesCS6A01G302300.1 | Wheat | nucleus, plastid | 45.36 | 42.55 |
| GSMUA_Achr5P16700_001 | Banana | cytosol | 31.61 | 42.14 |
| CDY14538 | Canola | nucleus | 42.86 | 41.38 |
| CDY08822 | Canola | nucleus | 42.68 | 41.28 |
| Bra024353.1-P | Field mustard | nucleus | 43.04 | 40.71 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 40.89 | 39.9 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 40.0 | 39.65 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 40.89 | 39.28 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 39.11 | 38.83 |
| TraesCS4A01G073900.1 | Wheat | cytosol | 31.07 | 37.42 |
| TraesCS5A01G202800.2 | Wheat | endoplasmic reticulum, vacuole | 27.68 | 34.83 |
| TraesCS1A01G039300.1 | Wheat | plastid | 34.64 | 32.66 |
| TraesCS3A01G114900.1 | Wheat | cytosol | 28.93 | 27.6 |
| TraesCS1A01G357300.2 | Wheat | cytosol | 29.29 | 25.87 |
| TraesCS3A01G244500.1 | Wheat | cytosol | 30.89 | 25.74 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G189600.1 | EnsemblPlantsGene:TraesCS4A01G189600 | Gene3D:3.60.10.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0046856 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPPc | InterPro:IPR036691 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF241 | PFAM:PF03372 | SEG:seg | SMART:SM00128 | SUPFAM:SSF56219 |
| MapMan:27.5.4.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:468248620..468251401
Molecular Weight (calculated)
61712.2 Da
IEP (calculated)
9.814
GRAVY (calculated)
-0.446
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQKTNRRKK SPFGRTPTMK GRNSSSRHGA ELSMNTTVDL KERPDHSPVA SPSASSSSFF KSTSLKFSNF SSPASTSTHI ESFRVFAATW NVAGKTPDME
101: LNLNDLLPSD DHSDIYVLGF QEVVPLNAGN VLVIEDNEPA SRWLALINQA LNRTSSSPPA SRSFSQSASP ASALHTASSS PLDPSLFHKN GSSPREVRRA
201: AITRGRRLKS CTCPAERPPR RRPYSKSSSS CLMMRCGSSK NRRRYAVEGD TTTSDEEDMD VVVDGGGEAS SMASDATLLL RPAAANLQRR YCLVACKQMV
301: GLFATVWARR ELVAHIGHVR LSCVGRGIMG RLGNKGCISV SMSLHQTSLC FVCSHLASGE KDGDELRRNS DVVEILKNTQ FRRVCKRSGR RIPERILDHD
401: RVIWLGDLNY RIALSYAEAK KLVDAGDWAA LFEKDQLKTE REGGVFRGWS EGVITFAPTY KYSWNSDSYY VGEDDDGAAS KKKTKRRTPA WCDRILWRGD
501: GIVQVAYVRG ESKFSDHRPV CGAFIVEIAV LDGTAKMVKL VAATASMKVG AEELLLPRQP
101: LNLNDLLPSD DHSDIYVLGF QEVVPLNAGN VLVIEDNEPA SRWLALINQA LNRTSSSPPA SRSFSQSASP ASALHTASSS PLDPSLFHKN GSSPREVRRA
201: AITRGRRLKS CTCPAERPPR RRPYSKSSSS CLMMRCGSSK NRRRYAVEGD TTTSDEEDMD VVVDGGGEAS SMASDATLLL RPAAANLQRR YCLVACKQMV
301: GLFATVWARR ELVAHIGHVR LSCVGRGIMG RLGNKGCISV SMSLHQTSLC FVCSHLASGE KDGDELRRNS DVVEILKNTQ FRRVCKRSGR RIPERILDHD
401: RVIWLGDLNY RIALSYAEAK KLVDAGDWAA LFEKDQLKTE REGGVFRGWS EGVITFAPTY KYSWNSDSYY VGEDDDGAAS KKKTKRRTPA WCDRILWRGD
501: GIVQVAYVRG ESKFSDHRPV CGAFIVEIAV LDGTAKMVKL VAATASMKVG AEELLLPRQP
001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ
Arabidopsis Description
IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.