Factsheet for TraesCS4D01G123400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G189600.1	Wheat	plastid	97.32	97.32
HORVU4Hr1G023500.2	Barley	nucleus, plastid	96.07	96.59
TraesCS4B01G129000.1	Wheat	nucleus, plastid	97.32	94.78
KXG27642	Sorghum	plastid	71.61	70.72
Zm00001d052401_P001	Maize	cytosol, nucleus, plastid	57.14	68.38
PGSC0003DMT400053156	Potato	mitochondrion	42.86	51.72
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	39.11	49.21
Bra031881.1-P	Field mustard	cytosol	40.36	48.6
GSMUA_Achr9P12980_001	Banana	nucleus	42.86	47.62
CDY33984	Canola	nucleus	40.18	47.57
TraesCS1D01G305500.1	Wheat	mitochondrion	49.29	47.42
VIT_00s0357g00110.t01	Wine grape	golgi	38.75	46.57
TraesCS3D01G331600.1	Wheat	nucleus, plastid	48.21	46.47
GSMUA_Achr7P17700_001	Banana	nucleus	41.96	46.26
TraesCS7D01G183100.1	Wheat	nucleus, plastid	42.5	45.77
KRH59383	Soybean	nucleus	47.14	45.28
KRH43218	Soybean	nucleus	47.14	45.28
AT5G65090.1	Thale cress	nucleus	41.96	44.42
Solyc04g054830.2.1	Tomato	nucleus	43.93	44.09
CDY31285	Canola	nucleus	41.79	42.39
GSMUA_Achr5P16700_001	Banana	cytosol	31.79	42.38
TraesCS6D01G281800.1	Wheat	nucleus, plastid	45.36	42.26
CDY14538	Canola	nucleus	42.68	41.21
CDY08822	Canola	nucleus	42.5	41.11
Bra024353.1-P	Field mustard	nucleus	42.86	40.54
TraesCS5D01G439900.1	Wheat	nucleus	39.82	39.47
TraesCS4D01G015900.2	Wheat	nucleus	38.93	38.65
TraesCS4D01G275200.1	Wheat	nucleus	40.0	38.55
TraesCS4D01G231500.1	Wheat	cytosol	30.18	36.34
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	27.32	32.14
TraesCS1D01G361500.2	Wheat	cytosol	29.29	25.95
TraesCS3D01G246900.1	Wheat	cytosol	30.89	25.71
TraesCS3D01G117300.2	Wheat	mitochondrion	28.93	25.16

Protein Annotations

EnsemblPlants:TraesCS4D01G123400.1	EnsemblPlantsGene:TraesCS4D01G123400	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF241	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:108011960..108014751

Molecular Weight (calculated)

61760.2 Da

IEP (calculated)

9.821

GRAVY (calculated)

-0.438

Length

560 amino acids

Sequence
(BLAST)

001: MDQKTNRRKK SPFGRIRAMK GRNSSSRHGA EHSMNTTVDL RESPEHSPVA SPSASSSSFF KSTSLKFSNF SSPASTSTHI ESFRVFAATW NVAGKTPDME
101: LNLNDFLPSD DHSDVYVLGF QEVVPLNAGN VLVIEDNEPA SRWLALINQA LNRTSSSPPA SRSFSQSASP ASALHTASSS PLDPSLFHKN GSSPREVRRA
201: AITRGRRLKS CTCPAERPPR RRPYSKSSSS CLMMRCGSSK NRRRYAVEGD TTTSDEEDMD VVVDGGGEAS SMASDATLLL RPAAANLQRR YCLVACKQMV
301: GLFATVWARR ELVAHIGHVR LSCVGRGIMG RLGNKGCISV SMSLHQTSLC FVCSHLASGE KDGDELRRNS DVVEILKNTQ FRRVCKRSGR RIPERILDHD
401: RVIWLGDLNY RIALSYAEAK KLVDAGDWAA LFEKDQLKTE REGGVFRGWS EAVISFAPTY KYSWNSDSYY VGEDDDGAAS KKKTKRRTPA WCDRILWRGD
501: GIVQVAYVRG ESKFSDHRPV CSAFIVDIAV LDGAAKMVKL VAATASMKVG AEELLLPRQT

Best Arabidopsis Sequence Match ( AT5G04980.1 )
(BLAST)

001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.