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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G123400.1 Wheat plastid 96.59 96.07
TraesCS4A01G189600.1 Wheat plastid 96.05 95.54
TraesCS4B01G129000.1 Wheat nucleus, plastid 96.05 93.04
KXG27642 Sorghum plastid 71.99 70.72
Zm00001d052401_P001 Maize cytosol, nucleus, plastid 57.81 68.8
PGSC0003DMT400053156 Potato mitochondrion 42.37 50.86
VIT_00s0556g00010.t01 Wine grape golgi, vacuole 39.68 49.66
Bra031881.1-P Field mustard cytosol 40.75 48.82
GSMUA_Achr9P12980_001 Banana nucleus 43.27 47.82
CDY33984 Canola nucleus 40.57 47.78
VIT_00s0357g00110.t01 Wine grape golgi 38.96 46.57
HORVU3Hr1G079850.4 Barley cytosol 48.65 46.56
GSMUA_Achr7P17700_001 Banana nucleus 42.37 46.46
KRH59383 Soybean nucleus 46.86 44.77
AT5G65090.1 Thale cress nucleus 42.37 44.61
KRH43218 Soybean nucleus 46.68 44.6
Solyc04g054830.2.1 Tomato nucleus 43.45 43.37
CDY31285 Canola nucleus 42.19 42.57
HORVU1Hr1G068860.1 Barley endoplasmic reticulum, plastid 49.91 42.19
GSMUA_Achr5P16700_001 Banana cytosol 31.6 41.9
HORVU6Hr1G075060.26 Barley nucleus 45.24 41.38
CDY14538 Canola nucleus 42.91 41.21
CDY08822 Canola nucleus 42.73 41.11
Bra024353.1-P Field mustard nucleus 43.09 40.54
HORVU4Hr1G073350.1 Barley cytosol, mitochondrion, nucleus 41.11 39.35
HORVU4Hr1G002820.15 Barley nucleus 39.14 38.52
HORVU5Hr1G104620.10 Barley nucleus 40.04 37.23
HORVU4Hr1G064440.3 Barley cytosol, nucleus 30.34 31.71
HORVU3Hr1G020880.11 Barley cytosol 29.44 25.95
HORVU1Hr1G080460.7 Barley cytosol, golgi, mitochondrion, plastid 29.8 24.34
HORVU3Hr1G067840.2 Barley cytosol 31.06 24.23
Protein Annotations
MapMan:27.5.4.1Gene3D:3.60.10.10InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046856
EnsemblPlantsGene:HORVU4Hr1G023500EnsemblPlants:HORVU4Hr1G023500.2InterPro:IPPcInterPro:IPR036691UniProt:M0Y3L2PFAM:PF03372
PANTHER:PTHR11200PANTHER:PTHR11200:SF241SMART:SM00128SUPFAM:SSF56219UniParc:UPI000294F7B2SEG:seg
Description
No Description!
Coordinates
chrchr4H:+:127526767..127531819
Molecular Weight (calculated)
61148.5 Da
IEP (calculated)
9.462
GRAVY (calculated)
-0.403
Length
557 amino acids
Sequence
(BLAST)
001: MDQKINTRKK SPFGSIPAMK GRNSSFRHGA EHSTVDLKES PEHSPVASPS ASSSSFFKST SLKFSNFSSP APTSTHIESF RVFAATWNVA GKTPDMELNL
101: NDFLPSDDHS DVYVLGFQEV VPLNAGNVLV IEDNEPASRW LALINQALNR TSSSPPASRS FSQSASPVSA LHTGSSSPLD PSLFHKNGSS PREVRRAAIT
201: RGRRLKSCTC PAERAPRRRP YSKSPSSCLM MRCGSSKNRR RYAVEGDTTT SDEEDMDVVV DGGGEASSMA SDATLLLQPA AANLQRRYCL VACKQMVGLF
301: ATVWARRELV AHIGHVRLSC VGRGIMGRLG NKGCISVSMS LHQTSLCFVC SHLASGEKDG DELRRNSDVV EILKNTQFRR VCKRSGRRIP ERILDHDRVI
401: WLGDLNYRIA LGYADAKKLV DAGDWAALFE KDQLKTEREG GVFRGWSEGV ISFAPTYKYS WNSDSYYAGE DDDGAASKKK TKRRTPAWCD RILWRGDGIV
501: QVAYVRGESK FSDHRPVCGA FIVEIAVLDG AAKMVKLVAA TASMKVGAEE LLLPRQP
Best Arabidopsis Sequence Match ( AT5G04980.1 )
(BLAST)
001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ
Arabidopsis Description
IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.