Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G434000.1 | Wheat | nucleus | 92.15 | 97.7 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 92.15 | 97.7 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 91.99 | 97.52 |
| Os03t0793600-00 | Rice | nucleus | 80.8 | 85.66 |
| EER93309 | Sorghum | nucleus | 78.63 | 83.51 |
| Zm00001d013090_P002 | Maize | nucleus | 76.96 | 81.31 |
| Zm00001d034410_P001 | Maize | plastid | 77.8 | 80.62 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 57.6 | 70.7 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 64.77 | 69.53 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 54.42 | 68.78 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 56.59 | 68.48 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 64.11 | 67.72 |
| Solyc09g065480.1.1 | Tomato | nucleus | 62.6 | 66.96 |
| PGSC0003DMT400049726 | Potato | nucleus | 62.44 | 66.79 |
| KRH32041 | Soybean | nucleus | 60.77 | 65.12 |
| KRH71395 | Soybean | nucleus | 60.43 | 64.64 |
| KRH67243 | Soybean | nucleus | 59.6 | 64.09 |
| KRG95566 | Soybean | nucleus | 59.77 | 64.04 |
| KRH32792 | Soybean | cytosol | 27.88 | 63.02 |
| KRG91335 | Soybean | nucleus | 59.93 | 62.11 |
| KRH77819 | Soybean | nucleus | 59.93 | 62.0 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 52.25 | 61.86 |
| AT3G63240.2 | Thale cress | nucleus | 56.43 | 61.79 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 58.26 | 61.66 |
| KRH27671 | Soybean | nucleus | 59.6 | 61.66 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 59.27 | 61.0 |
| CDY15542 | Canola | nucleus | 55.76 | 60.95 |
| KRH35494 | Soybean | nucleus | 59.6 | 60.82 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 51.92 | 60.51 |
| CDY47282 | Canola | nucleus | 56.09 | 60.11 |
| CDX86576 | Canola | nucleus | 56.26 | 60.07 |
| CDY15360 | Canola | nucleus | 55.93 | 60.04 |
| CDY10113 | Canola | nucleus | 55.59 | 59.68 |
| Bra007737.1-P | Field mustard | mitochondrion | 56.43 | 59.09 |
| PGSC0003DMT400042059 | Potato | nucleus | 58.76 | 59.06 |
| AT2G32010.3 | Thale cress | nucleus | 58.26 | 58.75 |
| CDY56450 | Canola | mitochondrion | 55.09 | 58.72 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 54.76 | 58.47 |
| Bra021766.1-P | Field mustard | nucleus | 55.93 | 58.06 |
| Solyc09g082370.2.1 | Tomato | nucleus | 60.43 | 58.01 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 56.26 | 58.0 |
| PGSC0003DMT400082071 | Potato | nucleus | 60.27 | 57.85 |
| Solyc06g054010.2.1 | Tomato | nucleus | 57.1 | 57.67 |
| Bra015428.1-P | Field mustard | nucleus | 54.92 | 56.43 |
| AT1G05470.2 | Thale cress | nucleus | 57.26 | 55.59 |
| Bra030611.1-P | Field mustard | nucleus | 56.26 | 54.01 |
| HORVU4Hr1G023500.2 | Barley | nucleus, plastid | 37.23 | 40.04 |
| HORVU3Hr1G079850.4 | Barley | cytosol | 37.9 | 39.0 |
| HORVU6Hr1G075060.26 | Barley | nucleus | 39.23 | 38.59 |
| HORVU4Hr1G064440.3 | Barley | cytosol, nucleus | 32.05 | 36.02 |
| HORVU1Hr1G068860.1 | Barley | endoplasmic reticulum, plastid | 38.9 | 35.36 |
| HORVU3Hr1G020880.11 | Barley | cytosol | 32.55 | 30.85 |
| HORVU3Hr1G067840.2 | Barley | cytosol | 36.39 | 30.53 |
| HORVU1Hr1G080460.7 | Barley | cytosol, golgi, mitochondrion, plastid | 34.22 | 30.06 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | UniProt:A0A287SK91 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0046856 | EnsemblPlantsGene:HORVU5Hr1G104620 | EnsemblPlants:HORVU5Hr1G104620.10 | InterPro:IPPc | InterPro:IPR036691 | PFAM:PF03372 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF130 | SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI000B46AAA0 | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:619716659..619721764
Molecular Weight (calculated)
68645.2 Da
IEP (calculated)
9.038
GRAVY (calculated)
-0.603
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEINKKSK VSWSKSLVRK WFNIKGKAQD FHADYDAATQ QGRDGGDEPR TSCSQRDAGA AKKSRTERSL KRNVDRVRRS RNEFDVSRLT EAQDYRIFAS
101: TWNVGGKCPS RGLDLDDWLH SSPPADIYVL GFQEIVPLNA GNVLGTEDNV PAKKWVSLIR RTLNKNPGPS SHGGYRTPSP VPDPVVELDA DFEGSLRRQD
201: SSSFFHRRSF QNLSRSLRVS GNDMFSQPRL DRRFSVCDPV NIGGRPSDFD GNFQCIGSPG DEYIDEDISN GAYFSPFPYG YGTSAPMEED DEQPNASRYC
301: LVASKQMVGI FLTVWVRSEI RDDIRNLKVS CVGRGLMGYL GNKGSISISM SLHHTTFCFV CCHLTSGEKE GDELRRNSDV MEILRKTRFP RVRGCGDVKS
401: PETILEHDRI LWLGDLNYRI SLPYSSAKVL VETHNWRQLL ERDQVICTTP LHGNVVFVAM LGKVNFRAML ELLLFEQLRI ERRCGHVFPG WKEGRIYFPP
501: TYKYSFNSDR YSGYGVRPKE KRRTPAWCDR ILWHGTGLIQ LSYVRGESRF SDHRPVYSIF MAEVEILHQR RRNMGYFSSR VEVEELLPYS HSHGNIKFY
101: TWNVGGKCPS RGLDLDDWLH SSPPADIYVL GFQEIVPLNA GNVLGTEDNV PAKKWVSLIR RTLNKNPGPS SHGGYRTPSP VPDPVVELDA DFEGSLRRQD
201: SSSFFHRRSF QNLSRSLRVS GNDMFSQPRL DRRFSVCDPV NIGGRPSDFD GNFQCIGSPG DEYIDEDISN GAYFSPFPYG YGTSAPMEED DEQPNASRYC
301: LVASKQMVGI FLTVWVRSEI RDDIRNLKVS CVGRGLMGYL GNKGSISISM SLHHTTFCFV CCHLTSGEKE GDELRRNSDV MEILRKTRFP RVRGCGDVKS
401: PETILEHDRI LWLGDLNYRI SLPYSSAKVL VETHNWRQLL ERDQVICTTP LHGNVVFVAM LGKVNFRAML ELLLFEQLRI ERRCGHVFPG WKEGRIYFPP
501: TYKYSFNSDR YSGYGVRPKE KRRTPAWCDR ILWHGTGLIQ LSYVRGESRF SDHRPVYSIF MAEVEILHQR RRNMGYFSSR VEVEELLPYS HSHGNIKFY
001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
Arabidopsis Description
IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.