Factsheet for Bra015428.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47282	Canola	nucleus	92.97	96.96
CDY10113	Canola	nucleus	89.88	93.91
AT1G05470.2	Thale cress	nucleus	93.65	88.49
Bra030611.1-P	Field mustard	nucleus	94.17	87.98
Bra021766.1-P	Field mustard	nucleus	83.36	84.23
KRH32792	Soybean	cytosol	35.51	78.11
KRG91335	Soybean	nucleus	73.58	74.22
KRH35494	Soybean	nucleus	74.61	74.11
KRH77819	Soybean	nucleus	73.58	74.09
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	72.04	74.07
KRH27671	Soybean	nucleus	72.9	73.4
VIT_07s0151g00590.t01	Wine grape	nucleus	65.69	68.64
PGSC0003DMT400082071	Potato	nucleus	71.7	66.99
Solyc09g082370.2.1	Tomato	nucleus	71.53	66.83
PGSC0003DMT400042059	Potato	nucleus	67.07	65.6
GSMUA_Achr2P08860_001	Banana	cytosol	48.03	64.97
KRH32041	Soybean	nucleus	62.09	64.76
Solyc06g054010.2.1	Tomato	nucleus	65.69	64.59
GSMUA_Achr5P02940_001	Banana	nucleus	53.86	64.34
GSMUA_Achr7P01420_001	Banana	nucleus	54.2	63.84
KRH71395	Soybean	nucleus	61.06	63.57
KRG95566	Soybean	nucleus	60.72	63.33
KRH67243	Soybean	nucleus	60.21	63.02
GSMUA_Achr4P21240_001	Banana	cytosol	51.11	62.87
Solyc09g065480.1.1	Tomato	nucleus	60.38	62.86
PGSC0003DMT400049726	Potato	nucleus	60.21	62.68
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	53.69	61.86
Os03t0793600-00	Rice	nucleus	57.98	59.82
GSMUA_Achr2P17460_001	Banana	nucleus	52.49	59.53
GSMUA_Achr7P07740_001	Banana	cytosol	51.63	59.49
GSMUA_Achr3P14960_001	Banana	nucleus	53.86	59.36
Os07t0175900-01	Rice	cytosol	57.98	59.3
EER98050	Sorghum	cytosol	57.63	59.05
Bra005834.1-P	Field mustard	endoplasmic reticulum	25.21	58.8
KXG37885	Sorghum	nucleus	55.92	58.63
EER92819	Sorghum	cytosol, mitochondrion, nucleus	58.15	58.55
TraesCS4A01G296200.1	Wheat	nucleus	56.6	58.51
Os03t0160600-01	Rice	mitochondrion	57.8	58.51
GSMUA_Achr7P25790_001	Banana	nucleus	50.77	58.5
Zm00001d048434_P001	Maize	mitochondrion	58.15	58.35
EER93309	Sorghum	nucleus	56.43	58.33
TraesCS4D01G015900.2	Wheat	nucleus	56.43	58.33
Zm00001d033451_P004	Maize	nucleus	55.92	58.32
TraesCS4D01G275200.1	Wheat	nucleus	57.98	58.18
TraesCS4B01G017400.1	Wheat	nucleus	56.09	57.98
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	57.98	57.88
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	57.8	57.8
TraesCS5B01G434000.1	Wheat	nucleus	55.92	57.7
Zm00001d013090_P002	Maize	nucleus	56.09	57.67
HORVU4Hr1G002820.15	Barley	nucleus	55.92	57.6
HORVU4Hr1G073350.1	Barley	cytosol, mitochondrion, nucleus	57.46	57.56
TraesCS5D01G439900.1	Wheat	nucleus	55.75	57.52
Bra007737.1-P	Field mustard	mitochondrion	56.43	57.52
TraesCS5A01G432000.1	Wheat	nucleus	55.57	57.35
Zm00001d013603_P006	Maize	nucleus	55.75	57.02
Os10t0422500-01	Rice	cytosol, mitochondrion, nucleus	56.95	56.27
Zm00001d034410_P001	Maize	plastid	55.4	55.88
HORVU5Hr1G104620.10	Barley	nucleus	56.43	54.92
TraesCS6A01G225700.2	Wheat	nucleus	53.86	54.7
Zm00001d018929_P002	Maize	cytosol	56.6	54.64
EER91601	Sorghum	nucleus	55.06	54.59
Zm00001d032935_P006	Maize	nucleus	54.72	53.98
Bra005195.1-P	Field mustard	nucleus	37.05	53.07
Bra017187.1-P	Field mustard	mitochondrion	38.59	45.45
Os03t0663700-01	Rice	nucleus	22.3	44.67
Bra000001.1-P	Field mustard	mitochondrion	38.42	44.44
Bra031881.1-P	Field mustard	cytosol	35.33	44.3
Bra028775.1-P	Field mustard	nucleus	35.85	44.0
Bra026626.1-P	Field mustard	mitochondrion	30.53	41.49
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	34.99	37.43
Bra024353.1-P	Field mustard	nucleus	37.39	36.82
Bra000691.1-P	Field mustard	mitochondrion	34.65	33.89
Bra012624.1-P	Field mustard	nucleus	34.82	32.58
Bra013275.1-P	Field mustard	nucleus	34.48	32.06
Bra016124.1-P	Field mustard	plastid	36.71	31.75
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	35.51	31.27
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	34.48	28.76

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EnsemblPlantsGene:Bra015428	EnsemblPlants:Bra015428.1	EnsemblPlants:Bra015428.1-P	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:M4DG05
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF174	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI00025438EE
SEG:seg	:	:	:	:	:

Description

AT2G32010 (E=1e-265) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA10:+:1828733..1830995

Molecular Weight (calculated)

66360.5 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.762

Length

583 amino acids

Sequence
(BLAST)

001: MVRKWFNIKS KTEEFQTDVP APSASNGIEV EHRSSFSVEK APTTINKSKT EKLSKNWEQQ ARQRRMNYEN PRIIDVQNYS IFTATWNVAG RSPPPDLNLD
101: EWLHSSAPAD IYVLGFQEIV PLNAGNVLGS EDNGPAQKWL SLIRKTLNNR PGASGGGAYH TPSPLPVPMA ELDADFSGST RQKNSTFFHR RSFQTPSSAC
201: NDPSIPQPGR FSVCDRVFFS QRPSDFDPSF RGGSSSHRPS DYSRRPSDYS RQSDYSNRPS DYYSRPSDYS RPSDFSRSSD DDNGTGDSPS TVLYSPGSAA
301: ANESGYRIPW NSSQYCLVAS KQMVGVFLTI WVKSELREHV KNMKVSCVGR GLMGYLGNKG SISISMLLHQ TSFCFVCTHL TSGQKEGDEL KRNSDVMEIL
401: KKTRFPRVKS LEEEKSPENI LQHDRVIWLG DLNYRIALTY RSAKALVEMQ NWRALLENDQ LRIEQKRGHV FKGWNEGKIY FPPTYKYSRN SDRYSGDDLH
501: PKEKRRTPAW CDRILWYGEG LHQLSYVRGE SKFSDHRPVY GIFCAEVESA HNKLKRTMSC SASRVQAEEL LPYSRGYTEL SFF

Best Arabidopsis Sequence Match ( AT1G05470.2 )
(BLAST)

001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF

Arabidopsis Description

IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.