Factsheet for Bra017187.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18445	Canola	mitochondrion	98.18	97.98
CDX93379	Canola	mitochondrion	95.56	95.36
Bra005195.1-P	Field mustard	nucleus	73.94	89.93
AT2G37440.1	Thale cress	mitochondrion	83.03	85.8
Bra000001.1-P	Field mustard	mitochondrion	85.86	84.33
KRG95832	Soybean	nucleus	56.36	59.36
KRH32331	Soybean	mitochondrion	54.55	58.32
KRH19738	Soybean	nucleus	54.75	58.03
KRH67562	Soybean	nucleus	57.78	58.01
Bra005834.1-P	Field mustard	endoplasmic reticulum	29.09	57.6
PGSC0003DMT400061482	Potato	nucleus	53.54	56.99
Solyc09g005690.2.1	Tomato	cytosol	47.07	55.08
VIT_08s0040g02520.t01	Wine grape	cytosol	53.74	54.96
Os05t0114100-00	Rice	cytosol, nucleus	43.03	49.08
GSMUA_Achr5P28560_001	Banana	nucleus	52.93	47.99
GSMUA_Achr8P02080_001	Banana	mitochondrion	49.7	43.54
EES18903	Sorghum	nucleus	46.87	42.73
TraesCSU01G006000.2	Wheat	plastid	49.49	42.68
TraesCS1A01G039300.1	Wheat	plastid	49.9	41.58
Bra031881.1-P	Field mustard	cytosol	38.99	41.51
TraesCS1B01G052100.1	Wheat	plastid	49.29	41.36
Zm00001d035612_P001	Maize	mitochondrion	43.84	41.33
Bra028775.1-P	Field mustard	nucleus	39.6	41.26
Bra007737.1-P	Field mustard	mitochondrion	47.47	41.08
Bra021766.1-P	Field mustard	nucleus	47.68	40.9
Zm00001d035614_P001	Maize	mitochondrion	43.03	40.73
GSMUA_Achr6P15360_001	Banana	nucleus	49.29	40.67
Bra026626.1-P	Field mustard	mitochondrion	34.14	39.39
Bra015428.1-P	Field mustard	nucleus	45.45	38.59
Bra030611.1-P	Field mustard	nucleus	46.26	36.7
Bra024353.1-P	Field mustard	nucleus	40.2	33.61
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	35.56	32.29
Bra012624.1-P	Field mustard	nucleus	37.17	29.53
Bra013275.1-P	Field mustard	nucleus	36.77	29.03
Bra000691.1-P	Field mustard	mitochondrion	34.95	29.03
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	36.77	27.49
Bra016124.1-P	Field mustard	plastid	37.37	27.45
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	35.76	25.32

Protein Annotations

EnsemblPlants:Bra017187.1	EnsemblPlants:Bra017187.1-P	EnsemblPlantsGene:Bra017187	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	PFAM:PF03372
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002544607	UniProt:M4DL06	MapMan:27.5.4.1	:

Description

AT2G37440 (E=3e-237) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA04:+:16133288..16136049

Molecular Weight (calculated)

56606.7 Da

IEP (calculated)

8.942

GRAVY (calculated)

-0.767

Length

495 amino acids

Sequence
(BLAST)

001: MGKILKSKSS WPGTVVRKWL NLRSNAYEFH SDYPVKGKME PTQPRRKSCS DGDYYKIVPE RFPGWLGQEN GDFKQSTDED HMTRADDLKM FVGTWNVGGK
101: SPHDGLELKD WLKSSTDADI YVLGFQEIVP LNAGNVLGAE DNGPATKWLS LIREALNNND LSQNDLELSK NHRTSFELTK SSQPSRRSIS NFPDDNPVAC
201: NSTLDRGYSL AASKQMVGIF LCVWVRDDLQ KRITNLKVSS VGRGIMGYLG NKGSISISMS LHETSLCFVC THLTSGEREG DEVRRNLDVT EILKRTRFSR
301: SSKDSHQPEM IMDHDKVIWL GDLNYRLRAS SDVHDHLKNH DWEALLQKDQ LKIEQKAGRV FQGWEEGKIY FAPTYKYHIN SDNYVAQTEK SKEKRRTPAW
401: CDRILWKGDG MKQIWYTRGE SRFSDHRPVQ SLFSVYIDST QNQPNRKSKP NNQNHRPNPV LPYTCHGKVQ AEEILLLTRA QSCIDTQPRL ISSAS

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.