Factsheet for GSMUA_Achr6P15360_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19738	Soybean	nucleus	43.67	56.1
KRH32331	Soybean	mitochondrion	42.67	55.29
GSMUA_Achr5P28560_001	Banana	nucleus	49.5	54.4
Bra005195.1-P	Field mustard	nucleus	36.83	54.3
KRG95832	Soybean	nucleus	42.5	54.26
AT2G37440.1	Thale cress	mitochondrion	42.67	53.44
CDX91363	Canola	mitochondrion	42.17	52.93
KRH67562	Soybean	nucleus	43.33	52.74
PGSC0003DMT400061482	Potato	nucleus	39.83	51.4
Os05t0114100-00	Rice	cytosol, nucleus	37.17	51.38
CDX79733	Canola	nucleus	37.33	50.91
CDX74960	Canola	mitochondrion	42.17	50.7
CDY18445	Canola	mitochondrion	41.33	50.0
VIT_08s0040g02520.t01	Wine grape	cytosol	40.17	49.79
CDY07789	Canola	mitochondrion	38.33	49.78
Solyc09g005690.2.1	Tomato	cytosol	35.0	49.65
GSMUA_Achr8P02080_001	Banana	mitochondrion	46.5	49.38
Bra017187.1-P	Field mustard	mitochondrion	40.67	49.29
Bra000001.1-P	Field mustard	mitochondrion	41.33	49.21
CDX93379	Canola	mitochondrion	40.67	49.19
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	31.33	47.72
GSMUA_Achr9P15810_001	Banana	cytosol	26.17	46.87
GSMUA_Achr4P21240_001	Banana	cytosol	35.0	44.3
EES18903	Sorghum	nucleus	39.83	44.01
TraesCSU01G006000.2	Wheat	plastid	41.0	42.86
GSMUA_Achr7P07740_001	Banana	cytosol	36.0	42.69
GSMUA_Achr5P02940_001	Banana	nucleus	34.67	42.62
GSMUA_Achr2P08860_001	Banana	cytosol	30.5	42.46
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	25.83	42.35
Zm00001d035612_P001	Maize	mitochondrion	37.0	42.29
Zm00001d035614_P001	Maize	mitochondrion	36.83	42.26
TraesCS1A01G039300.1	Wheat	plastid	41.67	42.09
TraesCS1B01G052100.1	Wheat	plastid	41.33	42.03
GSMUA_Achr2P17460_001	Banana	nucleus	36.0	42.02
GSMUA_Achr7P01420_001	Banana	nucleus	34.5	41.82
GSMUA_Achr7P11300_001	Banana	mitochondrion	27.17	41.06
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	26.67	40.71
GSMUA_Achr7P25790_001	Banana	nucleus	32.83	38.93
GSMUA_Achr9P12980_001	Banana	nucleus	32.5	38.69
GSMUA_Achr3P14960_001	Banana	nucleus	33.67	38.19
GSMUA_Achr9P23430_001	Banana	mitochondrion	29.67	37.87
GSMUA_Achr7P17700_001	Banana	nucleus	32.0	37.8
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	31.67	37.55
GSMUA_Achr10P...	Banana	mitochondrion	27.33	37.44
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	32.0	36.92
GSMUA_Achr3P27520_001	Banana	mitochondrion	29.67	35.39
GSMUA_Achr5P16700_001	Banana	cytosol	24.67	35.24
GSMUA_AchrUn_...	Banana	nucleus	31.33	32.41
GSMUA_Achr7P13350_001	Banana	mitochondrion	29.5	32.3
GSMUA_Achr10P...	Banana	cytosol	29.5	26.42
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	29.67	20.44

Protein Annotations

MapMan:15.5.15	MapMan:27.5.4.1	Gene3D:3.30.160.60	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSMUA_Achr6G15360_001	EnsemblPlants:GSMUA_Achr6P15360_001
EnsemblPlants:GSMUA_Achr6T15360_001	InterPro:IPPc	InterPro:IPR013087	InterPro:IPR036691	UniProt:M0T784	PFAM:PF03372
PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	SMART:SM00128
SMART:SM00355	SUPFAM:SSF56219	SUPFAM:SSF57667	UniParc:UPI000295EC78	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G15360_001]

Coordinates

chr6:-:10235348..10240730

Molecular Weight (calculated)

66383.0 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.432

Length

600 amino acids

Sequence
(BLAST)

001: MKRLVAEEEG GEMESIKNMA RALMLRSHGD ADVSSGSPPA RVFECKTCSR QFPSFQALGG HRASHKKPKL AEDGRGHGEA AKPRVHECAI CGLEFAIGQA
101: LGGHMRRHRA ATDAFAQGSP ERKAGEEKKR VIRIFGFELV DSTPSGGVEM SYRCILSQSS SWPKTVLRKW LNIRSGEFYS DCNKEEFAEM QRLRKSCSDK
201: NGSEWSIMVS EDVKRPETSS VAASSSPIDN LKLFVGTWNV GGRAPHGELL LRDWLMSSPS SPDIFVIGFQ EIVRLNAGNV LGAEDSGPAR RWLSLIRQAL
301: NCHEPGPPPA TSTVTAAGIP SLYRLAASKQ MVGVFLCVWV RASLVRHVAD IKVSCVGRGI MGYMGNKGSV SISMTVQRTT FCFVCTHLAS GERDGDEVRR
401: NSDVAEITKR TRFTGCSPET ILEHDKIVWL GDLNYRLAAT FGDTHELLQK KDWRSLLGKD QLRIEQRAGR AFAGWEEGQI RFPPTYKYLA NSDVYAVKPG
501: KPRRTPAWCD RILWRGKGMK QMWYVRGESQ FSDHRPVYSL FSVQVDDEAR SGDVGTTATV TAAKSSSNSS SSSSSWGRVQ AEELLLFTGT QGRRLQAARY

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.