Factsheet for GSMUA_Achr6P11400_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	37.2	73.97
GSMUA_Achr7P11300_001	Banana	mitochondrion	30.42	66.75
GSMUA_Achr9P15810_001	Banana	cytosol	24.57	63.88
PGSC0003DMT400058661	Potato	plastid	18.6	63.53
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	26.06	62.02
Solyc01g005090.2.1	Tomato	nucleus	24.34	60.74
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	26.98	59.8
PGSC0003DMT400069298	Potato	cytosol	21.93	58.41
TraesCS4A01G073900.1	Wheat	cytosol	30.88	57.85
TraesCS4B01G230100.1	Wheat	cytosol	30.77	57.76
TraesCS4D01G231500.1	Wheat	cytosol	30.77	57.63
VIT_01s0011g06310.t01	Wine grape	mitochondrion	28.59	56.72
Solyc06g072390.2.1	Tomato	cytosol	6.31	56.7
Bra026626.1-P	Field mustard	mitochondrion	27.78	56.41
CDY15795	Canola	mitochondrion	27.78	56.41
CDY09402	Canola	mitochondrion	27.78	56.41
AT2G01900.3	Thale cress	mitochondrion	27.21	55.76
Zm00001d028366_P001	Maize	cytosol	28.82	55.16
KRH58596	Soybean	mitochondrion	27.44	54.94
Zm00001d032253_P003	Maize	cytosol	21.58	54.81
KRH40911	Soybean	cytosol	28.36	54.65
Os03t0238300-01	Rice	cytosol	30.88	54.34
Solyc03g098030.2.1	Tomato	cytosol	23.54	53.52
KRH42503	Soybean	cytosol	27.21	53.5
KRH66073	Soybean	plastid	27.55	53.33
KRG89097	Soybean	cytosol	27.55	53.1
KXG39809	Sorghum	nucleus	29.85	52.31
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	31.0	50.66
Zm00001d047972_P001	Maize	mitochondrion	29.39	49.9
KRH48717	Soybean	cytosol	21.93	48.48
EES15004	Sorghum	mitochondrion	21.81	47.62
EES15005	Sorghum	cytosol	22.04	46.94
Os08t0425500-01	Rice	cytosol	22.04	46.38
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	15.96	43.99
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	19.63	43.4
KRH16316	Soybean	cytosol	5.74	41.67
GSMUA_Achr2P08860_001	Banana	cytosol	19.52	39.44
GSMUA_Achr4P21240_001	Banana	cytosol	20.9	38.4
GSMUA_Achr5P02940_001	Banana	nucleus	21.01	37.5
GSMUA_Achr9P23430_001	Banana	mitochondrion	19.86	36.81
GSMUA_Achr7P01420_001	Banana	nucleus	20.9	36.77
GSMUA_Achr9P12980_001	Banana	nucleus	20.55	35.52
GSMUA_Achr7P17700_001	Banana	nucleus	20.44	35.04
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	20.9	35.0
GSMUA_Achr7P25790_001	Banana	nucleus	20.09	34.59
GSMUA_Achr2P17460_001	Banana	nucleus	20.21	34.24
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	19.86	34.19
GSMUA_Achr3P27520_001	Banana	mitochondrion	19.63	34.0
GSMUA_Achr7P07740_001	Banana	cytosol	19.75	33.99
GSMUA_Achr3P14960_001	Banana	nucleus	20.32	33.46
GSMUA_AchrUn_...	Banana	nucleus	21.35	32.07
GSMUA_Achr7P13350_001	Banana	mitochondrion	19.98	31.75
GSMUA_Achr5P28560_001	Banana	nucleus	19.06	30.4
GSMUA_Achr8P02080_001	Banana	mitochondrion	19.4	29.91
GSMUA_Achr6P15360_001	Banana	nucleus	20.44	29.67
GSMUA_Achr5P16700_001	Banana	cytosol	13.89	28.81
GSMUA_Achr10P...	Banana	cytosol	20.32	26.42

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.40.50.1820	Gene3D:3.60.10.10	InterPro:AB_hydrolase	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSMUA_Achr6G11400_001	EnsemblPlants:GSMUA_Achr6P11400_001	EnsemblPlants:GSMUA_Achr6T11400_001	InterPro:Hydrolase_4
InterPro:IPPc	InterPro:IPR029058	InterPro:IPR036691	UniProt:M0T638	PFAM:PF03372	PFAM:PF12146
PANTHER:PTHR11200	PANTHER:PTHR11200:SF63	SMART:SM00128	SUPFAM:SSF53474	SUPFAM:SSF56219	UniParc:UPI0002956282
SEG:seg	:	:	:	:	:

Description

endonuclease/exonuclease/phosphatase family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G11400_001]

Coordinates

chr6:+:7561702..7573970

Molecular Weight (calculated)

97910.6 Da

IEP (calculated)

8.129

GRAVY (calculated)

-0.223

Length

871 amino acids

Sequence
(BLAST)

001: MNADRLPASS LSSNEPPDNS FDSSPGLILV NCQISYIYFL YIIASKKGGH GGVVVRVPAA MVPRRQREHD ASWRRALAVR RVVEAMKEGQ LGRDFSLFTT
101: ARGDTLFTQS WTPVNLKTRG LVVLLHGLNE HSGRYNDFAE KLNENGFKVY AMDWMGHGGS DGLHGYVHSL DYAVSDLETF LEKVLAENPG TPCFCFGHST
201: GAAIILKAAC DPKVEGWIKG LVLTSPAVLV QPSHPIVMVL APMFCLLAPK YQFSAANNSG SVVSRDPEAL QSKYSDPLVF TGSIRVRTGC EILRMSTYLL
301: QNLNKIKIPF LVLHGASDTV TDPEGSQRLF DEASSTDKSI KLYHNLLHDL LIEPEREKIM QDIIDWLSFR LSAGLSCGPL YPPSITLLIY IPPFDALKQI
401: LPSLPRSSAA IMPEKEQQVE VSTCFLLVCE CFLQELTKIL IFVQVLWPRL VANKLLRRPV GNNSFVADLP CSDVLLELAN LDEFDPKRPR KYLKDTRKYK
501: LYVGTWNVGG ILPSDDVNLE DWLDINNDYY DIYVLGFQEI VPLSAKNVLG AEKRRILAQW NSLVRTTLNK SSSNLEGRKE PKVGERHKAC PAKEGFARDF
601: RCIISKQMVG VLVSVWARHE LQYYIRHPSV SCVGCGVMGC LGNKGSVSVR FCLHETSFCF VCCHLASGGR KGDEMNRNSD AVDVLSRTSF PRGPSLDLPH
701: KILDHDRVIL LGDLNYRISL PEAITRSLVE QKQWDILLER DQLRTEVSKG RVFEDWQEGA ITFSPTYKYY PNSDKYYGCI QGQKGEKRRA PAWCDRILWH
801: GDGLKQKRYD RCESWLSDHR PVRAVFTASV DVRRSFNSLG SFFLSERFDR PDDEHANGGG GRRRSINVDA L

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.