Factsheet for Solyc06g072390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069298	Potato	cytosol	94.85	28.13
Solyc03g098030.2.1	Tomato	cytosol	75.26	19.06
Solyc01g005090.2.1	Tomato	nucleus	55.67	15.47
KRH48717	Soybean	cytosol	59.79	14.72
GSMUA_Achr9P15810_001	Banana	cytosol	49.48	14.33
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	53.61	14.21
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	56.7	13.99
Zm00001d032253_P003	Maize	cytosol	49.48	13.99
GSMUA_Achr7P11300_001	Banana	mitochondrion	56.7	13.85
Os09t0394600-01	Rice	mitochondrion	55.67	13.47
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	54.64	13.12
OQU89459	Sorghum	cytosol	56.7	12.85
GSMUA_Achr10P...	Banana	mitochondrion	57.73	12.79
Zm00001d028366_P001	Maize	cytosol	55.67	11.87
TraesCS4B01G230100.1	Wheat	cytosol	56.7	11.85
TraesCS4D01G231500.1	Wheat	cytosol	56.7	11.83
EES15004	Sorghum	mitochondrion	48.45	11.78
TraesCS5B01G201300.1	Wheat	cytosol	51.55	11.76
EES15005	Sorghum	cytosol	49.48	11.74
TraesCS4A01G073900.1	Wheat	cytosol	55.67	11.61
Os08t0425500-01	Rice	cytosol	48.45	11.35
Os03t0238300-01	Rice	cytosol	56.7	11.11
KXG39809	Sorghum	nucleus	55.67	10.87
Solyc02g087430.2.1	Tomato	mitochondrion, nucleus	50.52	10.72
Zm00001d047972_P001	Maize	mitochondrion	56.7	10.72
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	56.7	10.32
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	46.39	10.11
Solyc09g005690.2.1	Tomato	cytosol	42.27	9.69
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	46.39	9.45
Solyc09g065480.1.1	Tomato	nucleus	51.55	8.93
Solyc04g054830.2.1	Tomato	nucleus	50.52	8.78
Solyc06g054010.2.1	Tomato	nucleus	48.45	7.93
Solyc09g082370.2.1	Tomato	nucleus	49.48	7.69
Solyc08g077210.2.1	Tomato	mitochondrion	47.42	7.3
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	46.39	7.27
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	56.7	6.31
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	11.34	3.48

Protein Annotations

EnsemblPlants:Solyc06g072390.2.1	EnsemblPlantsGene:Solyc06g072390.2	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:IPR036691	PANTHER:PTHR11200
PANTHER:PTHR11200:SF63	SUPFAM:SSF56219	UniParc:UPI0002765796	UniProt:K4C8V9	MapMan:50.3.1	:

Description

No Description!

Coordinates

chr6:-:44662939..44663667

Molecular Weight (calculated)

11367.5 Da

IEP (calculated)

8.922

GRAVY (calculated)

-0.893

Length

97 amino acids

Sequence
(BLAST)

1: MKLKAELREG CIFNGWQEED IEFAPTYKYH PDSDDYYGCC QNGKRGKSRA PAWCDRIIWF GKGLKQSQYN RGEFRLSDHR PVRAIFKAEV KVPSPLH

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.