Factsheet for TraesCS4D01G231500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G230100.1	Wheat	cytosol	98.49	98.71
TraesCS4A01G073900.1	Wheat	cytosol	98.06	98.06
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	97.2	84.8
Zm00001d028366_P001	Maize	cytosol	76.34	78.02
Os03t0238300-01	Rice	cytosol	80.22	75.35
KXG39809	Sorghum	nucleus	78.28	73.24
Zm00001d047972_P001	Maize	mitochondrion	74.62	67.64
PGSC0003DMT400058661	Potato	plastid	33.12	60.39
GSMUA_Achr7P11300_001	Banana	mitochondrion	50.75	59.45
Solyc01g005090.2.1	Tomato	nucleus	43.87	58.45
GSMUA_Achr10P...	Banana	mitochondrion	53.76	57.08
Solyc06g072390.2.1	Tomato	cytosol	11.83	56.7
Bra026626.1-P	Field mustard	mitochondrion	52.26	56.64
CDY09402	Canola	mitochondrion	52.26	56.64
CDY15795	Canola	mitochondrion	51.61	55.94
AT2G01900.3	Thale cress	mitochondrion	50.97	55.76
PGSC0003DMT400069298	Potato	cytosol	38.28	54.43
VIT_01s0011g06310.t01	Wine grape	mitochondrion	51.18	54.21
KRH58596	Soybean	mitochondrion	49.89	53.33
KRH40911	Soybean	cytosol	50.32	51.77
KRH42503	Soybean	cytosol	49.25	51.69
KRH66073	Soybean	plastid	49.03	50.67
Solyc03g098030.2.1	Tomato	cytosol	41.08	49.87
KRG89097	Soybean	cytosol	48.39	49.78
KRH48717	Soybean	cytosol	39.78	46.95
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	42.58	41.6
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	27.96	41.14
KRH16316	Soybean	cytosol	9.89	38.33
TraesCS7D01G183100.1	Wheat	nucleus, plastid	38.49	34.42
TraesCS5D01G439900.1	Wheat	nucleus	41.29	33.98
TraesCS4D01G015900.2	Wheat	nucleus	40.65	33.51
TraesCS4D01G275200.1	Wheat	nucleus	40.0	32.01
TraesCS3D01G331600.1	Wheat	nucleus, plastid	39.35	31.5
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	57.63	30.77
TraesCS1D01G305500.1	Wheat	mitochondrion	38.49	30.76
TraesCS4D01G123400.1	Wheat	plastid	36.34	30.18
TraesCS6D01G281800.1	Wheat	nucleus, plastid	38.06	29.45
TraesCS1D01G361500.2	Wheat	cytosol	38.06	28.01
TraesCS3D01G117300.2	Wheat	mitochondrion	36.99	26.71
TraesCS3D01G246900.1	Wheat	cytosol	37.63	26.0

Protein Annotations

EnsemblPlants:TraesCS4D01G231500.1	EnsemblPlantsGene:TraesCS4D01G231500	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF141	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:391452349..391455152

Molecular Weight (calculated)

51868.2 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.512

Length

465 amino acids

Sequence
(BLAST)

001: MLENQSQAEV LWPRLVANKL FRKPSGSHAF VADFPAAAGA AEEEFDGCGS PDADAQRCVK RPRPQQRNKT LKYRLFASTW NVGGVAPPDD LDLSDWLDTR
101: NGTYDIYVLG FQEVVPLRAR NVLGADKNRI GMRWNELVRA ALNRSSPSPS PGATGGGEKQ KVHPVRDGAG GLQSRDFRCV VSKQMVGILL TVWVRGDLRR
201: FVRRPSVSCV GCGVMGCLGN KGAVSVRFWL RDTSFCFVCC HLASGGREGD EAHRNADAAE ILRRTSFPRR HCSSSSPSLA TPHKILDHDR VILLGDLNYR
301: ISLPEAKTRL LVERHDWKTL LDNDQLRGEV SSEGGTFNGW NEGAITFSPT YKYHRNSDAY YGCAQLGSKG DKLKRRAPAW CDRVLWRGAG LRQTRYDRCE
401: SRLSDHRPVR AAFAVEVDAP WNLNSLRSFF LSERFDDRAK GPADGLFLLR EDDHTAASAR YAEDV

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.