Factsheet for TraesCS5D01G209200.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	91.81	98.2
TraesCS5B01G201300.1	Wheat	cytosol	82.77	92.71
Os09t0394600-01	Rice	mitochondrion	60.92	72.32
OQU89459	Sorghum	cytosol	62.4	69.39
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	57.56	67.82
PGSC0003DMT400069298	Potato	cytosol	36.55	53.21
Solyc01g005090.2.1	Tomato	nucleus	36.76	50.14
PGSC0003DMT400058661	Potato	plastid	25.63	47.84
Solyc03g098030.2.1	Tomato	cytosol	38.03	47.26
AT2G01900.3	Thale cress	mitochondrion	41.6	46.59
Solyc06g072390.2.1	Tomato	cytosol	9.45	46.39
KRH48717	Soybean	cytosol	38.24	46.19
Bra026626.1-P	Field mustard	mitochondrion	40.97	45.45
CDY09402	Canola	mitochondrion	40.97	45.45
CDY15795	Canola	mitochondrion	40.97	45.45
KRH66073	Soybean	plastid	42.86	45.33
KRH58596	Soybean	mitochondrion	41.18	45.06
KRH16316	Soybean	cytosol	11.34	45.0
VIT_01s0011g06310.t01	Wine grape	mitochondrion	41.39	44.87
KRH40911	Soybean	cytosol	42.44	44.69
KRG89097	Soybean	cytosol	42.44	44.69
KRH42503	Soybean	cytosol	41.39	44.47
TraesCS4D01G231500.1	Wheat	cytosol	41.6	42.58
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	28.15	42.41
TraesCS5D01G439900.1	Wheat	nucleus	35.5	29.91
TraesCS7D01G183100.1	Wheat	nucleus, plastid	32.35	29.62
TraesCS4D01G015900.2	Wheat	nucleus	34.45	29.08
TraesCS4D01G275200.1	Wheat	nucleus	33.4	27.37
TraesCS4D01G123400.1	Wheat	plastid	32.14	27.32
TraesCS6D01G281800.1	Wheat	nucleus, plastid	33.82	26.79
TraesCS1D01G305500.1	Wheat	mitochondrion	32.56	26.63
TraesCS3D01G331600.1	Wheat	nucleus, plastid	31.93	26.16
TraesCS1D01G361500.2	Wheat	cytosol	32.14	24.21
TraesCS3D01G117300.2	Wheat	mitochondrion	28.78	21.27
TraesCS3D01G246900.1	Wheat	cytosol	29.62	20.95

Protein Annotations

EnsemblPlants:TraesCS5D01G209200.2	EnsemblPlantsGene:TraesCS5D01G209200	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF63	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
TMHMM:TMhelix	MapMan:27.5.4.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:315925848..315928250

Molecular Weight (calculated)

53611.5 Da

IEP (calculated)

8.426

GRAVY (calculated)

-0.215

Length

476 amino acids

Sequence
(BLAST)

001: MSWTNYVSCE HFKFCTKEKK KTFLELVETM RSLLTCNSVN ILATAFSLFF PAHLLSYIFA AFAVFMITCC MPLLDSKPIS SLSIVGYHNM GENRKFGQII
101: LPRMTTNKIL HHQELHGDQS ISDVSGIVDE TLGKSPLDRQ DTLKYRVFAS TWNIGGIAPT DDLDLEDWLD TRANSYDIYV LGFQEIVPLN AVNVLGPSKR
201: CISTKWNSLI GKALNKKKTR DGAQLQHTTT NSSAMESFGQ EECFICIRSK QMVGIFTSVW VRSNLRLYIH HLDASCVGSG IMGYLGNKGS VSVRFLLHET
301: SFCVVCCHLA SGGKQGDVLL RNFDAADILA RTRFHGGGGG NKKLPKKILD HDQVVLLGDL NYRISLEEPE TRLLVKAKNW STLLENDQEG PVTFSPTYKY
401: QPNSDQYYWC FEAARGEKKR APAWCDRILW RGKGLKQIQY GTCDYKLSDH RPVRAGFIAE CRIRGDAEDS IGGFMR

Best Arabidopsis Sequence Match ( AT2G01900.1 )
(BLAST)

001: MWPRLVANKI LRKSLGSNNF VADFPPNTDQ KLIEASGLAD ERSKSILHNQ HKTTLLNYKV FVSTWNVGGI VPDDGLDMED LLETHKTPCD IYVLGFQEVV
101: PLRASNVLGS DNNKVSTKWN SLIRDALNKR ARPHRDEDLS ESKGINGISQ DFRCIISKQM VGILITVWVR GDLWPYIRYP SVSCVGCGIM GCLGNKGSVS
201: VRFQLHETTF CFVCSHLASG GRDRDERQRN SDVNEILARS SFPRGSSLDL PKKILDHDRV IFLGDLNYRI SLPEEKTRLL VESKKWNILL ENDQLRMEIM
301: NGQIFRGWQE GIVKFAPTYK YVPNSDLYYG CITYKKDEKK RAPAWCDRII WYGNGLKQHE YTRGETKISD HRPVKAIFTT EITVTRRGKK IRNFFFSDRF
401: EERIGDIDSK DYSWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.