Factsheet for Solyc03g098030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g072390.2.1	Tomato	cytosol	19.06	75.26
KRH48717	Soybean	cytosol	56.66	55.08
GSMUA_Achr9P15810_001	Banana	cytosol	47.78	54.63
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	44.65	54.11
Solyc01g005090.2.1	Tomato	nucleus	49.09	53.87
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	50.39	52.73
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	52.22	50.89
Zm00001d032253_P003	Maize	cytosol	43.86	48.98
GSMUA_Achr7P11300_001	Banana	mitochondrion	50.65	48.87
GSMUA_Achr10P...	Banana	mitochondrion	53.52	46.8
Os09t0394600-01	Rice	mitochondrion	48.83	46.63
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	48.04	45.54
TraesCS5B01G201300.1	Wheat	cytosol	49.61	44.71
OQU89459	Sorghum	cytosol	48.83	43.69
EES15004	Sorghum	mitochondrion	43.86	42.11
TraesCS4B01G230100.1	Wheat	cytosol	49.87	41.16
Zm00001d028366_P001	Maize	cytosol	48.83	41.1
TraesCS4D01G231500.1	Wheat	cytosol	49.87	41.08
TraesCS4A01G073900.1	Wheat	cytosol	49.61	40.86
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	47.26	40.67
EES15005	Sorghum	cytosol	43.34	40.59
Os08t0425500-01	Rice	cytosol	43.6	40.34
Os03t0238300-01	Rice	cytosol	49.35	38.18
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	47.26	38.03
KXG39809	Sorghum	nucleus	49.09	37.83
Zm00001d047972_P001	Maize	mitochondrion	49.87	37.23
Solyc09g005690.2.1	Tomato	cytosol	39.69	35.93
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	49.87	35.83
Solyc02g087430.2.1	Tomato	mitochondrion, nucleus	40.21	33.7
Solyc09g065480.1.1	Tomato	nucleus	45.43	31.07
Solyc04g054830.2.1	Tomato	nucleus	44.13	30.29
Solyc06g054010.2.1	Tomato	nucleus	43.86	28.33
Solyc09g082370.2.1	Tomato	nucleus	44.91	27.56
Solyc08g077210.2.1	Tomato	mitochondrion	40.47	24.6
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	38.9	24.07
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	53.52	23.54

Protein Annotations

EnsemblPlants:Solyc03g098030.2.1	EnsemblPlantsGene:Solyc03g098030.2	Gene3D:3.60.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF190	PFAM:PF03372
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002768768	UniProt:K4BJL9	MapMan:27.5.4.1	:

Description

No Description!

Coordinates

chr3:+:60381911..60384405

Molecular Weight (calculated)

43637.6 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.457

Length

383 amino acids

Sequence
(BLAST)

001: MWLALAANNI LEDGQNHEVD YQTTSAQIQN LTLFVSSWNV GGIAPPSELN MEDLLHDENN LADIYVLGFQ EIVPLNAGNI LVQENTSISM QWNSLIRTAL
101: NKTDDIRLHH KAELGESHQK VYPLKREGSF TSNSPHFECI ISKQMVGIFI TIWARSPLLP YIRHTSVSSV GCGIFGCLGN KGSVSVRFCL HETSFCFVCS
201: HLASGGKEGD KRERNANASQ ILSRTQFSSD PFQCLPRKIL QHDRVIWLGD LNYRICLPEP TTRSLVNDRQ WSTLLQNDQL KAELREGCTF EGWNEEEIEF
301: APTYKYNLDS DDYYGCNNQK GKKEKNRTPA WCDRIIWFGK GLKQRQYSRG ESKLSDHRPV RAIFTAEVKV QCQSTENFVK MFS

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.