CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032253_P003	Maize	cytosol	74.94	87.17
EES15005	Sorghum	cytosol	68.67	66.99
Os08t0425500-01	Rice	cytosol	64.16	61.84
OQU89459	Sorghum	cytosol	55.39	51.64
PGSC0003DMT400069298	Potato	cytosol	39.85	48.62
Solyc06g072390.2.1	Tomato	cytosol	11.78	48.45
Solyc01g005090.2.1	Tomato	nucleus	41.1	46.99
GSMUA_Achr7P11300_001	Banana	mitochondrion	46.12	46.35
PGSC0003DMT400058661	Potato	plastid	28.82	45.1
GSMUA_Achr10P...	Banana	mitochondrion	48.87	44.52
KRH48717	Soybean	cytosol	43.61	44.16
Solyc03g098030.2.1	Tomato	cytosol	42.11	43.86
VIT_01s0011g06310.t01	Wine grape	mitochondrion	47.37	43.05
AT2G01900.3	Thale cress	mitochondrion	44.86	42.12
Bra026626.1-P	Field mustard	mitochondrion	43.61	40.56
CDY15795	Canola	mitochondrion	43.61	40.56
CDY09402	Canola	mitochondrion	43.61	40.56
KRH58596	Soybean	mitochondrion	44.11	40.46
KRH66073	Soybean	plastid	45.36	40.22
KXG39809	Sorghum	nucleus	49.87	40.04
KRH42503	Soybean	cytosol	44.11	39.73
KRH40911	Soybean	cytosol	44.11	38.94
KRG89097	Soybean	cytosol	43.86	38.72
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	29.57	37.34
KRH16316	Soybean	cytosol	10.53	35.0
KXG22413	Sorghum	peroxisome	35.59	32.13
KXG19625	Sorghum	nucleus	38.6	30.14
EES18903	Sorghum	nucleus	40.85	30.02
KXG37885	Sorghum	nucleus	40.85	29.32
EER93309	Sorghum	nucleus	41.1	29.08
EER98050	Sorghum	cytosol	41.1	28.82
OQU87743	Sorghum	plastid	38.85	28.13
EER92819	Sorghum	cytosol, mitochondrion, nucleus	40.35	27.81
KXG27642	Sorghum	plastid	39.35	27.69
EER91601	Sorghum	nucleus	40.6	27.55
KXG30738	Sorghum	nucleus	39.6	27.34
EES18414	Sorghum	nucleus, plastid	36.84	27.12
KXG22411	Sorghum	mitochondrion	37.34	24.96
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.85	24.22
EES01371	Sorghum	plastid	37.09	22.73
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	47.62	21.81

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8075382	UniProt:C5YL18	EnsemblPlants:EES15004	ProteinID:EES15004
ProteinID:EES15004.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF147	SMART:SM00128	EnsemblPlantsGene:SORBI_3007G131600
SUPFAM:SSF56219	UniParc:UPI0001A87B02	RefSeq:XP_002445509.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:54862978..54865463

Molecular Weight (calculated)

44629.3 Da

IEP (calculated)

9.429

GRAVY (calculated)

-0.380

Length

399 amino acids

Sequence
(BLAST)

001: MGKSPRLAQM IWPRSAARRV LVDHQQFVSE FSGFELEKSS MLGEQSETVK YRVFTGTWNV GGVAPPDDLS LEDWLDTKTD SYDIYVLGFQ EMVPLNARTV
101: LGPKQRRAAM KWQLLIGDAL NSTRHGDGAA AMHDQGRQGG GVFRCLVSKQ MVGIFVSVWT RTSLRRHAVR HPAVSSVGAG VLGRLGNKGA VSVRFLLHGT
201: SFCFVCCHLA SGGEEGDVLR RNADAADILT RTSFLSSGGA PAAPDELPKK ILGHDRVVLF GDLNYRIAKD DDEEARQLVR ARKWSMLLEN DELLLELSSG
301: RQFDGWHEGR VAFAPTYKYR RNSDQFCWCA DGGVATGRLD KQQHRHRRRA PAWCDRILWR GKGMKQVRYE RCGGYRLSDH RPVRAVFHAV CELVEGVDA

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.