CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018078_P002	Maize	nucleus	91.35	91.19
Zm00001d052232_P002	Maize	nucleus	83.22	90.58
Os02t0751900-01	Rice	plasma membrane	76.3	77.92
TraesCS6B01G331500.1	Wheat	nucleus, plastid	73.7	71.0
TraesCS6D01G281800.1	Wheat	nucleus, plastid	73.7	70.88
TraesCS6A01G302300.1	Wheat	nucleus, plastid	73.01	70.69
HORVU6Hr1G075060.26	Barley	nucleus	73.36	69.62
PGSC0003DMT400053156	Potato	mitochondrion	48.27	60.13
Bra031881.1-P	Field mustard	cytosol	47.58	59.14
KXG19625	Sorghum	nucleus	51.9	58.71
CDY33984	Canola	nucleus	47.92	58.56
GSMUA_Achr9P12980_001	Banana	nucleus	50.69	58.13
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	42.21	54.83
GSMUA_Achr7P17700_001	Banana	nucleus	47.58	54.13
AT5G65090.1	Thale cress	nucleus	49.13	53.69
Solyc04g054830.2.1	Tomato	nucleus	51.56	53.41
VIT_00s0357g00110.t01	Wine grape	golgi	42.21	52.36
CDY31285	Canola	nucleus	49.48	51.81
CDY08822	Canola	nucleus	50.69	50.6
KRH43218	Soybean	nucleus	51.04	50.6
KRH59383	Soybean	nucleus	51.04	50.6
CDY14538	Canola	nucleus	50.69	50.52
GSMUA_Achr5P16700_001	Banana	cytosol	36.51	50.24
Bra024353.1-P	Field mustard	nucleus	50.69	49.49
EES18414	Sorghum	nucleus, plastid	45.16	48.16
OQU87743	Sorghum	plastid	44.12	46.28
KXG27642	Sorghum	plastid	43.25	44.09
OQU89459	Sorghum	cytosol	30.97	41.82
EER98050	Sorghum	cytosol	40.48	41.12
EES15004	Sorghum	mitochondrion	27.34	39.6
KXG37885	Sorghum	nucleus	37.72	39.21
EER93309	Sorghum	nucleus	38.24	39.18
EES15005	Sorghum	cytosol	27.68	39.12
EER92819	Sorghum	cytosol, mitochondrion, nucleus	38.75	38.69
KXG22413	Sorghum	peroxisome	28.72	37.56
EER91601	Sorghum	nucleus	38.06	37.41
EES18903	Sorghum	nucleus	33.56	35.73
KXG39809	Sorghum	nucleus	29.76	34.61
KXG22411	Sorghum	mitochondrion	30.97	29.98
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.62	27.66
EES01371	Sorghum	plastid	30.62	27.19

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	UniProt:A0A194YR81	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	EnsemblPlants:KXG30738	ProteinID:KXG30738	ProteinID:KXG30738.1
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF106	SMART:SM00128	EnsemblPlantsGene:SORBI_3004G234000	SUPFAM:SSF56219
UniParc:UPI0003C6CD83	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:58243852..58247089

Molecular Weight (calculated)

65155.7 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.535

Length

578 amino acids

Sequence
(BLAST)

001: MSNHNAPCDI PKPASVDEFL VKNGKKKKSF MSGLFRKKGR GMDKKLLSRR DIVFDLEGKS GDRMDLLEAS PAVRKSFSDR HCTTRIENLT LSCLDSPIRP
101: NVDTREYRVF VGTWNVGGKP PDSSINLEEF LQIEGLPDIY VLGFQEIVPL NAGNVLVVED NEPAGKWMEL IYQALNKPPA QDGQSSGDEL SPPESTTSHY
201: AQPSQVRVGG RDPSSTAIPK SSSGGQLFAQ NNKPPPLKVV NKSYRVDNAL VKTCTCMSDP STMQRRAREM REFLYRVEAA AASPNRGAVD DDDALPSIEG
301: SDQRGAGMNY CLIARKQMVG IFLSVWVRRE LVQYVGHLRV DCVGRGIMGR LGNKGCIAMS MTLHHTSICF VCCHLASGEK EGDEVRRNSD VAEILKNAQF
401: QRICKVPGQR VPEKIIDHDR IIWLGDLNYR VSLSYEETKA LLEENEWDIL LEKDQLAMER QAGRVFKGWK EGKIYFAPTY KYKQNSDSYV WETAKSKKKR
501: RTPAWCDRIL WHGQGIEQLQ YIRGEFRLSD HRPVCSVFVV EADVDSGSKI RKGYSTLDAR IHCDSSAIPK RHSFYDDF

Best Arabidopsis Sequence Match ( AT5G65090.1 )
(BLAST)

001: MNNRGNNDDL DHHYGVFNDF ERRMTSRKKS VLDNTSPMIW KTVSERKSSP GIEGLNLSSF DRPMAPTTEI RELRVFLATW NVGGRTPNND LNLEDFLLVE
101: GTADLYICGF QEIVPLSAGN VLVVEDNEPA AKWLALISQA LNKPKQESVY SNAAYSASRT TTCSSSSCGS EESRAPSSLS FFQRPNLKVL SRNYRVDSSL
201: LKTCNCPVID TSVGWEARRS KRFSDPSTDS SNNVEPENFR VHENFLFDDV PATTKMPGQM SYRLIASKQM VGLFLSVWAR RELIPHISHL RLDSVGRGIM
301: GRLGNKGCIA ISMSLHQTSF CFVCSHLASG EKEGDELRRN ADVAEILKHT QFPKLTKNPN CHAPERIIDH DRVLWLGDLN YRVALTYEET RVLLEDNDWD
401: TLLERDQLNM ERGAGRVFSG FQEGQIFFAP TYKYSQNSDA YAGEMTKSKK KRRTPAWCDR ILWKGEGIEQ LSYIRGESRF SDHRPVCAIF AVEVDVKSLN
501: KGRFRKGYSC AAVRLVEDVA IPQRHSFYD

Arabidopsis Description

IP5P5Type I inositol polyphosphate 5-phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.