CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0175900-01	Rice	cytosol	88.05	87.89
Zm00001d018929_P002	Maize	cytosol	92.09	86.75
EER93309	Sorghum	nucleus	79.26	79.96
GSMUA_Achr5P02940_001	Banana	nucleus	61.16	71.31
VIT_07s0151g00590.t01	Wine grape	nucleus	69.42	70.79
GSMUA_Achr7P01420_001	Banana	nucleus	61.16	70.3
GSMUA_Achr4P21240_001	Banana	cytosol	57.82	69.41
PGSC0003DMT400049726	Potato	nucleus	67.84	68.93
Solyc09g065480.1.1	Tomato	nucleus	67.49	68.57
KRH67243	Soybean	nucleus	66.43	67.86
KRG95566	Soybean	nucleus	66.61	67.8
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	67.49	67.72
KRH32041	Soybean	nucleus	66.43	67.62
KRH71395	Soybean	nucleus	65.73	66.79
KXG37885	Sorghum	nucleus	65.03	66.55
KRH32792	Soybean	cytosol	30.4	65.28
EER92819	Sorghum	cytosol, mitochondrion, nucleus	66.08	64.94
GSMUA_Achr7P07740_001	Banana	cytosol	57.29	64.43
AT3G63240.2	Thale cress	nucleus	61.51	63.99
KRH77819	Soybean	nucleus	64.67	63.56
KRH27671	Soybean	nucleus	64.32	63.21
KRG91335	Soybean	nucleus	63.97	62.98
EER91601	Sorghum	nucleus	65.03	62.93
GSMUA_Achr2P17460_001	Banana	nucleus	56.41	62.45
KRH35494	Soybean	nucleus	64.15	62.18
CDY15360	Canola	nucleus	60.81	62.01
CDY15542	Canola	nucleus	59.23	61.5
CDY47282	Canola	nucleus	60.11	61.18
CDX86576	Canola	nucleus	59.93	60.78
CDY10113	Canola	nucleus	59.58	60.75
Bra007737.1-P	Field mustard	mitochondrion	60.98	60.66
CDY56450	Canola	mitochondrion	59.75	60.5
CDX76691	Canola	cytosol, mitochondrion, nucleus	59.58	60.43
AT2G32010.3	Thale cress	nucleus	62.57	59.93
Bra021766.1-P	Field mustard	nucleus	60.63	59.79
CDY60962	Canola	cytosol, golgi, nucleus	60.63	59.38
PGSC0003DMT400042059	Potato	nucleus	61.16	58.39
Solyc09g082370.2.1	Tomato	nucleus	63.97	58.33
PGSC0003DMT400082071	Potato	nucleus	63.8	58.17
Bra015428.1-P	Field mustard	nucleus	59.05	57.63
Solyc06g054010.2.1	Tomato	nucleus	59.75	57.34
AT1G05470.2	Thale cress	nucleus	61.51	56.73
Bra030611.1-P	Field mustard	nucleus	60.11	54.81
EES18414	Sorghum	nucleus, plastid	40.77	42.8
KXG19625	Sorghum	nucleus	38.14	42.47
OQU87743	Sorghum	plastid	40.95	42.29
KXG27642	Sorghum	plastid	41.3	41.45
EES15005	Sorghum	cytosol	29.7	41.32
KXG22413	Sorghum	peroxisome	31.99	41.18
OQU89459	Sorghum	cytosol	30.93	41.12
EES15004	Sorghum	mitochondrion	28.82	41.1
KXG30738	Sorghum	nucleus	41.12	40.48
EES18903	Sorghum	nucleus	37.96	39.78
KXG39809	Sorghum	nucleus	34.27	39.24
KXG22411	Sorghum	mitochondrion	35.85	34.17
EES01371	Sorghum	plastid	37.61	32.87
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	36.38	32.34

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8060726	UniProt:C5XAF9	EnsemblPlants:EER98050	ProteinID:EER98050
ProteinID:EER98050.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF130	SMART:SM00128	EnsemblPlantsGene:SORBI_3002G050500
SUPFAM:SSF56219	UniParc:UPI0001A84240	RefSeq:XP_002461529.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:4764508..4770026

Molecular Weight (calculated)

64869.3 Da

IEP (calculated)

9.409

GRAVY (calculated)

-0.695

Length

569 amino acids

Sequence
(BLAST)

001: MTEESAKKSK LSWSKSLVRK WFNIRPKAQD FHADFDASQA RDGGGGSWKP SCSSSEASAS TAAKKSRTDR SSSKRSAERA RRGKNNFDAA RLTEVQDYRI
101: FAATWNVGGK SPPRGLNLDE WLHTSPPADI YVLGFQEIVP LNAGNVLGTE DNLPAKKWVS LIRRTLNKNP GASGCGGYHT PSPVLDPVVE LDADFEGSAR
201: RQENFSFFHR RSFHNLSRSL RMDGDFMFPQ PRLDRRFSVC DPVNLGGRPS DFDGNLRCPG SPDEDNIDME VSDGAQISPF PHSYSASAPS EQNDDQSNSS
301: RYCLVASKQM VGIFLTVWVR NEIRDDVRNL KVSCVGRGLM GYLGNKGSIS ISMSLHQTSF CFICCHLTSG EKEGDELRRN SDVLEILRKT RFPRVRGAGD
401: VKSPETILDH DRIIWLGDLN YRIALSYCSA KALVEMHNWK QLLEKDQLRM QQRYGRVFQG WREGRIYFPP TYKYSFNSDR YAGEGRHPKE KRRTPAWCDR
501: ILWYGNGLNQ LSYVRGESRF SDHRPVYSIF LAEVDIVHQR RRNMGYFSSR IEVEELLPHS QSYREIKFY

Best Arabidopsis Sequence Match ( AT2G32010.3 )
(BLAST)

001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF

Arabidopsis Description

IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.