Factsheet for Bra021766.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60962	Canola	cytosol, golgi, nucleus	94.8	94.15
AT2G32010.3	Thale cress	nucleus	90.47	87.88
Bra015428.1-P	Field mustard	nucleus	84.23	83.36
Bra030611.1-P	Field mustard	nucleus	86.66	80.13
KRH32792	Soybean	cytosol	35.53	77.36
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	73.48	74.78
KRG91335	Soybean	nucleus	74.18	74.05
KRH35494	Soybean	nucleus	75.04	73.76
KRH77819	Soybean	nucleus	73.83	73.58
KRH27671	Soybean	nucleus	73.31	73.06
VIT_07s0151g00590.t01	Wine grape	nucleus	66.9	69.18
PGSC0003DMT400082071	Potato	nucleus	72.79	67.31
Solyc09g082370.2.1	Tomato	nucleus	72.79	67.31
KRH32041	Soybean	nucleus	64.3	66.37
GSMUA_Achr7P01420_001	Banana	nucleus	56.67	66.06
GSMUA_Achr5P02940_001	Banana	nucleus	55.81	65.98
PGSC0003DMT400042059	Potato	nucleus	68.11	65.94
GSMUA_Achr4P21240_001	Banana	cytosol	53.73	65.4
GSMUA_Achr2P08860_001	Banana	cytosol	48.7	65.2
KRH71395	Soybean	nucleus	63.08	65.0
Solyc06g054010.2.1	Tomato	nucleus	66.72	64.92
KRG95566	Soybean	nucleus	62.74	64.76
KRH67243	Soybean	nucleus	62.22	64.45
Solyc09g065480.1.1	Tomato	nucleus	61.7	63.57
PGSC0003DMT400049726	Potato	nucleus	61.53	63.39
GSMUA_Achr3P14960_001	Banana	nucleus	57.19	62.38
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	54.42	62.06
Os03t0793600-00	Rice	nucleus	59.97	61.24
Bra005834.1-P	Field mustard	endoplasmic reticulum	26.52	61.2
GSMUA_Achr2P17460_001	Banana	nucleus	54.25	60.89
GSMUA_Achr7P07740_001	Banana	cytosol	53.38	60.87
KXG37885	Sorghum	nucleus	58.58	60.79
GSMUA_Achr7P25790_001	Banana	nucleus	53.21	60.67
EER98050	Sorghum	cytosol	59.79	60.63
TraesCS4D01G015900.2	Wheat	nucleus	59.1	60.46
EER92819	Sorghum	cytosol, mitochondrion, nucleus	60.66	60.45
TraesCS4A01G296200.1	Wheat	nucleus	58.93	60.28
Os07t0175900-01	Rice	cytosol	59.45	60.18
Zm00001d033451_P004	Maize	nucleus	58.23	60.11
TraesCS4B01G017400.1	Wheat	nucleus	58.75	60.11
Zm00001d048434_P001	Maize	mitochondrion	60.49	60.07
EER93309	Sorghum	nucleus	58.58	59.93
Os03t0160600-01	Rice	mitochondrion	59.79	59.9
HORVU4Hr1G002820.15	Barley	nucleus	58.58	59.72
TraesCS5B01G434000.1	Wheat	nucleus	57.89	59.12
Zm00001d013090_P002	Maize	nucleus	58.06	59.08
Zm00001d013603_P006	Maize	nucleus	58.06	58.77
TraesCS5A01G432000.1	Wheat	nucleus	57.54	58.76
TraesCS5D01G439900.1	Wheat	nucleus	57.54	58.76
TraesCS4D01G275200.1	Wheat	nucleus	59.1	58.69
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	59.1	58.49
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	59.1	58.39
HORVU4Hr1G073350.1	Barley	cytosol, mitochondrion, nucleus	58.75	58.25
Bra007737.1-P	Field mustard	mitochondrion	57.54	58.04
Os10t0422500-01	Rice	cytosol, mitochondrion, nucleus	59.27	57.97
Zm00001d034410_P001	Maize	plastid	57.19	57.09
Zm00001d018929_P002	Maize	cytosol	59.62	56.95
TraesCS6A01G225700.2	Wheat	nucleus	55.81	56.1
HORVU5Hr1G104620.10	Barley	nucleus	58.06	55.93
EER91601	Sorghum	nucleus	56.67	55.61
Bra005195.1-P	Field mustard	nucleus	38.65	54.79
Zm00001d032935_P006	Maize	nucleus	55.81	54.48
Bra017187.1-P	Field mustard	mitochondrion	40.9	47.68
Bra000001.1-P	Field mustard	mitochondrion	41.07	47.02
Os03t0663700-01	Rice	nucleus	23.57	46.74
Bra028775.1-P	Field mustard	nucleus	38.3	46.53
Bra031881.1-P	Field mustard	cytosol	36.22	44.95
Bra026626.1-P	Field mustard	mitochondrion	31.2	41.96
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	35.53	37.61
Bra024353.1-P	Field mustard	nucleus	38.3	37.33
Bra000691.1-P	Field mustard	mitochondrion	34.84	33.72
Bra012624.1-P	Field mustard	nucleus	36.4	33.71
Bra013275.1-P	Field mustard	nucleus	36.22	33.33
Bra016124.1-P	Field mustard	plastid	37.61	32.2
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	36.74	32.02
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	35.18	29.04

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EnsemblPlantsGene:Bra021766	EnsemblPlants:Bra021766.1	EnsemblPlants:Bra021766.1-P	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004439	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0005975	GO:GO:0006629
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009628
GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987
GO:GO:0010051	GO:GO:0010067	GO:GO:0010305	GO:GO:0010588	GO:GO:0016020	GO:GO:0016787
GO:GO:0032957	GO:GO:0034485	GO:GO:0046030	GO:GO:0046855	GO:GO:0046856	GO:GO:0071472
GO:GO:2000377	InterPro:IPPc	InterPro:IPR036691	UniProt:M4DZ19	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF174	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002544F0B	SEG:seg	:

Description

AT2G32010 (E=3e-295) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA04:+:14351228..14353543

Molecular Weight (calculated)

66321.7 Da

IEP (calculated)

9.106

GRAVY (calculated)

-0.742

Length

577 amino acids

Sequence
(BLAST)

001: MKLSWSKKMV RKWFNIKSKT EEFQADVSLP QVVEVEHRSS ISEKEPSTIK KSKAEKLNKN WEQQARQRRM NYENPRIIDV QNYSIFVATW NVAGRSPPED
101: LNLDEWLHSS APADIYVLGF QEIVPLNAGN VLGAEDNGPA KKWHSLIRKT LNNLPGTSSL SHTPSPIPVP IAEIDADFSG SSRQTFFNRR SFQTPSIWRT
201: DENDSSATQP PVERRLSVCD RVFFSHRPSD FDPSFRCSHR PSDYSRASDY YSRPSDYYSR ASDYSRQSDV SRCGYSDDDY APGDSPSTGL YSPGSNENGS
301: RISWNSSQYC LVASKQMVGI FLTVWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM LLHQTSFCFV CTHLTSGQKE GDELRRNSDV MEILKKTRFP
401: RVQSSAGEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK RGHVFKGWDE GKIYFPPTYK YSTNSDRYAG DDLHPKEKRR
501: TPAWCDRILW YGEGLHQLCY VRGESRFSDH RPVYGIFSAE VESNHKRLKR ATSYSTSRVQ AEELLPYPRG YTELTFF

Best Arabidopsis Sequence Match ( AT2G32010.3 )
(BLAST)

001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF

Arabidopsis Description

IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.