Factsheet for Bra005195.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74960	Canola	mitochondrion	98.77	80.56
CDX91363	Canola	mitochondrion	93.12	79.29
AT2G37440.1	Thale cress	mitochondrion	88.21	74.95
Bra017187.1-P	Field mustard	mitochondrion	89.93	73.94
Bra000001.1-P	Field mustard	mitochondrion	88.7	71.63
Bra005834.1-P	Field mustard	endoplasmic reticulum	35.38	57.6
KRH32331	Soybean	mitochondrion	60.93	53.56
KRH19738	Soybean	nucleus	61.43	53.53
KRG95832	Soybean	nucleus	60.93	52.77
VIT_08s0040g02520.t01	Wine grape	cytosol	62.41	52.48
KRH67562	Soybean	nucleus	62.9	51.93
Solyc09g005690.2.1	Tomato	cytosol	53.81	51.77
Os05t0114100-00	Rice	cytosol, nucleus	55.04	51.61
PGSC0003DMT400061482	Potato	nucleus	58.23	50.97
GSMUA_Achr5P28560_001	Banana	nucleus	58.23	43.41
Bra031881.1-P	Field mustard	cytosol	47.42	41.51
Bra028775.1-P	Field mustard	nucleus	48.4	41.47
TraesCSU01G006000.2	Wheat	plastid	55.04	39.02
Zm00001d035612_P001	Maize	mitochondrion	49.88	38.67
Bra021766.1-P	Field mustard	nucleus	54.79	38.65
Bra007737.1-P	Field mustard	mitochondrion	53.81	38.29
GSMUA_Achr8P02080_001	Banana	mitochondrion	53.07	38.23
Bra026626.1-P	Field mustard	mitochondrion	40.29	38.23
Zm00001d035614_P001	Maize	mitochondrion	48.89	38.05
TraesCS1A01G039300.1	Wheat	plastid	55.28	37.88
TraesCS1B01G052100.1	Wheat	plastid	54.79	37.8
EES18903	Sorghum	nucleus	49.63	37.2
Bra015428.1-P	Field mustard	nucleus	53.07	37.05
GSMUA_Achr6P15360_001	Banana	nucleus	54.3	36.83
Bra030611.1-P	Field mustard	nucleus	53.56	34.94
Bra024353.1-P	Field mustard	nucleus	47.42	32.6
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	42.26	31.56
Bra000691.1-P	Field mustard	mitochondrion	43.98	30.03
Bra012624.1-P	Field mustard	nucleus	44.47	29.05
Bra013275.1-P	Field mustard	nucleus	43.49	28.23
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	42.75	26.28
Bra016124.1-P	Field mustard	plastid	43.0	25.96
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	41.77	24.32

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EnsemblPlantsGene:Bra005195	EnsemblPlants:Bra005195.1	EnsemblPlants:Bra005195.1-P	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:M4CLV8
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI000254799F
SEG:seg	:	:	:	:	:

Description

AT2G37440 (E=2e-170) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA05:-:3936683..3938386

Molecular Weight (calculated)

46241.6 Da

IEP (calculated)

8.546

GRAVY (calculated)

-0.624

Length

407 amino acids

Sequence
(BLAST)

001: MFVGTWNVGG KSPHDGLDLK DWLQSPADAD IYVLGFQEIV PLNAGNVLGA EDNGPVAKWL SLIREALNNN NHNLSQNDLK LSKNHRTSFE LTKSSQQPRL
101: SFSNISDDNP ASCNSTTPQG YSLAASKQMV GIFLCVWVRD DLRKRITNLK VSCVGRGIMG YLGNKGSISI SMSVHETSLC FVCTHLTSGE KEGDEVRRNL
201: DVTEILKRTR FSRSSKDSRP ETIMDHDKVI WLGDLNYRLR ASSDVHEQLN NNDWEALLEK DQLKIEQRAG RVFQGWEEGK IYFAPTYKYL INSDNYVAQT
301: EKSKEKRRTP AWCDRILWKG DGMKQIWYTR GESRFSDHRP VQSLFSVHID LTLNQSNRKT KPNNENHRPN PVLPYTCHGK VQAEEILLLT RAQSCIDTQP
401: RLISSVS

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.