CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67562	Soybean	nucleus	91.28	87.02
KRH32331	Soybean	mitochondrion	70.64	71.71
KRH19738	Soybean	nucleus	70.64	71.09
Bra005195.1-P	Field mustard	nucleus	52.77	60.93
VIT_08s0040g02520.t01	Wine grape	cytosol	60.85	59.09
CDX91363	Canola	mitochondrion	60.0	59.0
AT2G37440.1	Thale cress	mitochondrion	60.0	58.87
PGSC0003DMT400061482	Potato	nucleus	56.6	57.2
CDX74960	Canola	mitochondrion	60.0	56.51
CDY18445	Canola	mitochondrion	59.57	56.45
Bra017187.1-P	Field mustard	mitochondrion	59.36	56.36
CDY07789	Canola	mitochondrion	55.32	56.28
CDX93379	Canola	mitochondrion	58.94	55.85
CDX79733	Canola	nucleus	52.13	55.68
Solyc09g005690.2.1	Tomato	cytosol	50.0	55.56
Bra000001.1-P	Field mustard	mitochondrion	59.15	55.16
KRH32792	Soybean	cytosol	28.3	50.19
Os05t0114100-00	Rice	cytosol, nucleus	45.96	49.77
GSMUA_Achr5P28560_001	Banana	nucleus	56.6	48.72
GSMUA_Achr8P02080_001	Banana	mitochondrion	55.32	46.02
KRH37570	Soybean	cytosol	10.43	43.75
EES18903	Sorghum	nucleus	50.0	43.28
KRG89576	Soybean	cytosol	10.21	42.86
TraesCSU01G006000.2	Wheat	plastid	52.13	42.68
KRH32041	Soybean	nucleus	50.64	42.58
GSMUA_Achr6P15360_001	Banana	nucleus	54.26	42.5
KRG95566	Soybean	nucleus	50.43	42.4
KRH67243	Soybean	nucleus	50.21	42.37
KRH71395	Soybean	nucleus	50.21	42.14
TraesCS1A01G039300.1	Wheat	plastid	52.98	41.92
TraesCS1B01G052100.1	Wheat	plastid	52.55	41.86
Zm00001d035612_P001	Maize	mitochondrion	46.6	41.71
KRH77819	Soybean	nucleus	49.79	40.41
KRH27671	Soybean	nucleus	49.79	40.41
Zm00001d035614_P001	Maize	mitochondrion	44.68	40.15
KRG91335	Soybean	nucleus	49.36	40.14
KRH35494	Soybean	nucleus	50.0	40.03
KRH58596	Soybean	mitochondrion	36.81	39.77
KRH13212	Soybean	nucleus	41.49	38.61
KRH20549	Soybean	nucleus	41.49	38.46
KRH42503	Soybean	cytosol	36.17	38.37
KRH48717	Soybean	cytosol	32.13	38.32
KRH66073	Soybean	plastid	36.17	37.78
KRH40911	Soybean	cytosol	36.17	37.61
KRH18550	Soybean	cytosol	36.6	37.15
KRG93446	Soybean	cytosol	36.81	37.05
KRG89097	Soybean	cytosol	35.11	36.5
KRH43218	Soybean	nucleus	44.04	35.51
KRH59383	Soybean	nucleus	43.83	35.33
KRH77232	Soybean	cytosol	40.64	33.39
KRH28263	Soybean	cytosol	40.85	30.48
KRH04304	Soybean	cytosol, mitochondrion, nucleus	39.79	29.73
KRH57586	Soybean	nucleus	39.36	29.65
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	38.72	28.84
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	38.51	28.68
KRH16316	Soybean	cytosol	7.23	28.33
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	38.51	28.33
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	38.51	28.24
KRH04678	Soybean	cytosol	15.74	21.7

Protein Annotations

EntrezGene:100777569	MapMan:27.5.4.1	Gene3D:3.60.10.10	EMBL:ACUP02012139	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
EnsemblPlantsGene:GLYMA_19G173900	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:K7MYV3
EnsemblPlants:KRG95832	ProteinID:KRG95832	ProteinID:KRG95832.1	ProteinID:KRG95833.1	ProteinID:KRG95834.1	ProteinID:KRG95835.1
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI00029516BC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:43420997..43432466

Molecular Weight (calculated)

52699.9 Da

IEP (calculated)

9.293

GRAVY (calculated)

-0.457

Length

470 amino acids

Sequence
(BLAST)

001: MRTESKKISK SSWPKLAVRK WLNIKSSAER FHSDYDATTA AIAKERRRSC SDRDRYVVVP DDLSEGWVMD STSGMKKKSA PGPGTGGPDL RMFVGTWNVG
101: GKSPNEGFNL RNWLTCPSPA DIYIIGFQEI VPLNAGNVLG PEDSGPAAKW LGLIREALNS NEELDNTGQN SPKSSPRYCL AASKQMVGIF LSVWVRADLC
201: NHVTNLKVSC VGRGIMGYLG NKGSTSISMT LYNTTFCFVC THLTSGEKFG DELRRNLDVS EILKKTKFYH SFKSLAHPLP PESILEHDNI IWLGDLNYRL
301: ASGYDDTHEL LKKNNWQALL EKDQLRIEQK AGRVFKGWNE GNIYFAPTYK YLTNSDHYVA QSSKSKIKRR TPAWCDRILW KGEGLNQMCY VRGESKFSDH
401: RPVYSLFSVQ VDMKSKNIAP STATMPRCCP LKPLTNSSLS STCCTAKVQA EEQLLLLTRA QSCIDTVPRF

Best Arabidopsis Sequence Match ( AT2G37440.2 )
(BLAST)

001: MFVGTWNVGG KSPHEGLDLK DWLKSPADAD IYVLGYAYNH INWFYRTFNI LFLEFQEIVP LNAGNVLGAE DNGPAAKWLS LIREALNNTN NLSFSGLSDD
101: TPIPCNSTPP RGYSLAASKQ MVGIFLCVWV RDDLRKRITN LKVSCVGRGI MGYLGNKGSV SISMSLHETS LCFVCTHLTS GEKEGDELRR NLDVTEIFKR
201: TRFSRSSKDS RPETIMDHDK VIWLGDLNYR LRASSDLHEQ LRNHDWESLL EKDQLKIEQR AGRIFKGWEE GKIYFAPTYK YRINSDNYVV QTEKSKEKRR
301: TPAWCDRILW KGDGMKQLWY VRGESKFSDH RPVQSLFSVH IDLKNQSNRK TKPVNQNHRP NPVLTYTCHG KVQAEEILLL TRAQSCIDTL PRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.