CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000001.1-P	Field mustard	mitochondrion	99.78	91.47
CDX79733	Canola	nucleus	82.68	86.82
CDX91363	Canola	mitochondrion	86.58	83.68
CDX74960	Canola	mitochondrion	87.23	80.76
CDY18445	Canola	mitochondrion	86.36	80.44
AT2G37440.1	Thale cress	mitochondrion	83.12	80.17
CDX93379	Canola	mitochondrion	84.63	78.83
KRH32331	Soybean	mitochondrion	55.63	55.51
KRG95832	Soybean	nucleus	56.28	55.32
KRH19738	Soybean	nucleus	55.63	55.03
KRH67562	Soybean	nucleus	56.93	53.35
PGSC0003DMT400061482	Potato	nucleus	52.81	52.47
CDY70508	Canola	cytosol	38.1	52.23
VIT_08s0040g02520.t01	Wine grape	cytosol	53.9	51.45
Solyc09g005690.2.1	Tomato	cytosol	46.54	50.83
GSMUA_Achr5P28560_001	Banana	nucleus	52.38	44.32
Os05t0114100-00	Rice	cytosol, nucleus	41.13	43.78
TraesCSU01G006000.2	Wheat	plastid	49.57	39.9
GSMUA_Achr8P02080_001	Banana	mitochondrion	48.7	39.82
EES18903	Sorghum	nucleus	46.32	39.41
TraesCS1B01G052100.1	Wheat	plastid	50.22	39.32
TraesCS1A01G039300.1	Wheat	plastid	49.57	38.55
CDY15360	Canola	nucleus	46.54	38.53
CDX76691	Canola	cytosol, mitochondrion, nucleus	46.75	38.5
CDY04934	Canola	nucleus	39.39	38.48
CDY14134	Canola	plastid	39.39	38.48
GSMUA_Achr6P15360_001	Banana	nucleus	49.78	38.33
CDY56450	Canola	mitochondrion	46.54	38.26
CDY33984	Canola	nucleus	38.96	38.05
Zm00001d035612_P001	Maize	mitochondrion	42.86	37.71
CDX80935	Canola	nucleus	38.31	37.5
CDY53817	Canola	nucleus	26.41	37.42
Zm00001d035614_P001	Maize	mitochondrion	42.21	37.28
CDY15542	Canola	nucleus	44.16	37.23
CDY60962	Canola	cytosol, golgi, nucleus	46.75	37.18
CDX86576	Canola	nucleus	45.02	37.08
CDY10113	Canola	nucleus	44.59	36.92
CDY09402	Canola	mitochondrion	34.2	36.83
CDY47282	Canola	nucleus	44.37	36.67
CDY15795	Canola	mitochondrion	33.77	36.36
CDX78819	Canola	nucleus	27.92	35.83
CDY53820	Canola	mitochondrion	21.21	33.68
CDY31285	Canola	nucleus	40.04	33.51
CDY08822	Canola	nucleus	40.26	32.12
CDY14538	Canola	nucleus	40.26	32.07
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	36.15	31.04
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	36.58	31.01
CDY05076	Canola	mitochondrion	36.58	29.39
CDX90734	Canola	mitochondrion	36.58	29.14
CDX90428	Canola	nucleus	39.18	28.28
CDY44496	Canola	nucleus	37.88	28.0
CDX72820	Canola	cytosol, nucleus, plastid	37.23	27.0
CDX68304	Canola	cytosol, nucleus, plastid	37.01	26.89
CDX96338	Canola	plastid	37.45	26.57
CDY37949	Canola	cytosol, nucleus, plastid	33.55	25.08
CDY68359	Canola	nucleus	28.36	24.72
CDY03700	Canola	cytosol, nucleus, plastid	33.33	23.84
CDY53816	Canola	cytosol	9.74	18.59

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078F409	UniProt:A0A078F409	EnsemblPlants:CDY07789	ProteinID:CDY07789
ProteinID:CDY07789.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00124923001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EE7302	SEG:seg	:	:	:

Description

BnaA03g17220DBnaA03g17220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F409]

Coordinates

chrLK031980:-:972654..975238

Molecular Weight (calculated)

53331.7 Da

IEP (calculated)

9.685

GRAVY (calculated)

-0.612

Length

462 amino acids

Sequence
(BLAST)

001: MGKILKTKSS WPRTVVRKWL NLRSSAYEFH SDYQVKGERL ARAVTEPTQP RRKSCSDGDY YMIVPGKYPG WLGQANGDLN QSMGEHVARV DDKLDLKMFV
101: GTWNVGGKSP HDGLDLKDWL KSPADTDIYV LGFQEIVPLN AALNNNNNIS HKDLELSINH RTFLELAKSS QQPRYSLAAS KQMVGIFLCV WIRDDLRKRI
201: TNLKVSCVGR GIMGYLGNKG SISISMSLHE TSLCFVCTHL TSGEREGDEI RRNLDVTEII KRTRFSRSSK DFQPESIMDH DKVIWLGDLN YRLRASSDVH
301: EQLKNHDWEA LLEKDQLKIE QRAGRVFHGW EEGKIYFAPT YKYFINSDNY VVQTEKSKEK RRTPAWCDRI LWKGDGMKQI WYTRGESRFS DHRPVQSLFS
401: FHIDLTQNQS NRKTRLIHQN HRPNPVLPYT CHGKVHAEEI LLLTRAQSCI VTQPRLISSA IH

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.