CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90428	Canola	nucleus	97.55	80.78
Bra012624.1-P	Field mustard	nucleus	94.53	80.42
CDY44496	Canola	nucleus	85.09	72.16
AT4G18010.1	Thale cress	nucleus	87.92	72.14
CDX78819	Canola	nucleus	43.02	63.33
KRH04304	Soybean	cytosol, mitochondrion, nucleus	56.23	47.38
KRH57586	Soybean	nucleus	55.47	47.12
KRH28263	Soybean	cytosol	55.28	46.51
KRH77232	Soybean	cytosol	50.19	46.5
VIT_02s0012g00550.t01	Wine grape	mitochondrion	54.34	45.86
GSMUA_Achr9P23430_001	Banana	mitochondrion	40.57	45.74
PGSC0003DMT400052816	Potato	mitochondrion	53.21	45.56
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	52.64	45.07
Solyc08g077210.2.1	Tomato	mitochondrion	52.08	43.81
PGSC0003DMT400062236	Potato	mitochondrion	52.08	43.81
GSMUA_Achr3P27520_001	Banana	mitochondrion	40.57	42.74
Zm00001d019672_P002	Maize	cytosol	32.45	34.47
CDY70508	Canola	cytosol	20.94	32.94
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	31.89	31.01
CDX91363	Canola	mitochondrion	27.55	30.54
CDX79733	Canola	nucleus	25.28	30.45
CDY56450	Canola	mitochondrion	32.26	30.43
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	30.75	30.3
CDX76691	Canola	cytosol, mitochondrion, nucleus	31.89	30.12
CDY53816	Canola	cytosol	13.58	29.75
CDX74960	Canola	mitochondrion	27.92	29.66
CDY18445	Canola	mitochondrion	27.17	29.03
CDX93379	Canola	mitochondrion	26.98	28.83
CDX90734	Canola	mitochondrion	31.13	28.45
CDY07789	Canola	mitochondrion	24.72	28.36
CDY05076	Canola	mitochondrion	30.75	28.35
CDY15795	Canola	mitochondrion	22.64	27.97
CDY09402	Canola	mitochondrion	22.64	27.97
CDY15360	Canola	nucleus	28.87	27.42
CDX72820	Canola	cytosol, nucleus, plastid	32.64	27.16
CDY15542	Canola	nucleus	27.74	26.82
CDX96338	Canola	plastid	32.83	26.73
CDY10113	Canola	nucleus	28.11	26.7
CDY47282	Canola	nucleus	28.11	26.65
CDX86576	Canola	nucleus	28.11	26.56
CDY60962	Canola	cytosol, golgi, nucleus	28.87	26.33
CDY53817	Canola	nucleus	16.04	26.07
CDY37949	Canola	cytosol, nucleus, plastid	30.0	25.73
CDX80935	Canola	nucleus	22.83	25.64
CDX68304	Canola	cytosol, nucleus, plastid	30.75	25.63
CDY04934	Canola	nucleus	22.45	25.16
CDY14134	Canola	plastid	22.26	24.95
CDY33984	Canola	nucleus	22.08	24.74
CDY03700	Canola	cytosol, nucleus, plastid	29.81	24.46
CDY31285	Canola	nucleus	23.58	22.64
CDY08822	Canola	nucleus	24.53	22.45
CDY14538	Canola	nucleus	24.53	22.41
CDY53820	Canola	mitochondrion	11.89	21.65
KRG89576	Soybean	cytosol	0.19	0.89
KRH37570	Soybean	cytosol	0.19	0.89

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078JNL9	UniProt:A0A078JNL9	EnsemblPlants:CDY68359	ProteinID:CDY68359
ProteinID:CDY68359.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00073527001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF236	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EED805	SEG:seg	:	:	:

Description

BnaCnng58640DBnaCnng58640D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JNL9]

Coordinates

chrLK037223:-:1..3212

Molecular Weight (calculated)

60025.5 Da

IEP (calculated)

7.183

GRAVY (calculated)

-0.710

Length

530 amino acids

Sequence
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNIKPKVYD FSEDEVDTEN ESEDDVCSVK NVSNACCVAD EDSHGGRQAD HGNKISDGGV RGYQRKHRRG KSETLRVQYI
101: NTKEIRVTVA TWNVAGKRPS DDLDIDDWLS TDNPSDIYII GFQEVVPLNA GNVFGAEDRG PIPRWESIIR RTLNKPQKES VYNQSPNNNN VLHRSHSAPS
201: SPVLAQQANS IIADVMVENL AADRSLDLAT DEFIDAATAL PSLEPVGNPD MDWPERALDE NPQIVGSEGK LRRVLSSNAM LGFKLPENPT GVSRFASDAR
301: NLKRSRSFET LKLSWNDIKE ENDNTSSSSL SEAEEAVKVM SDNSLDGESS SDEGDKIRNA YSLSEDLVKE CRKVKDCQKY VRIVSKQMVG IYVSVWIRRR
401: LRRHVNNLKV SPVGVGLMGY MGNKGSVSIS MTLYQSRMCF VCSHLTSGQK EGAEQRRNAD VYEIIRRTRF SSVLDTDQPR TIPCHDQVFW FGDLNYRLNM
501: SDSEVRKLVA QKRWDELKNS DQLIRELRRG

Best Arabidopsis Sequence Match ( AT4G18010.1 )
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNRKPKVYD FSEDEIDTEP ESEDDVCSVK DVPNVHCVTD EDSHNGRRGS EADHGNNISD GGVSVRGGYQ RKHRRGKSET
101: LRAQYINTKD IKVTVATWNV AGKRPSDDLE IEDWLSTDNP SDIYIIGFQE VVPLNAGNVF GAEDRGPIPK WESIIRRTLN KSNKESVYDQ SPSCNNNALH
201: RSHSAPSSPI LAQEANSIIS HVMVENLVAD HSLDLATNEF IDAATALPSL EPQRNPNMDW PELALDSNPQ IVGSEGKLRR VFSSNATLGF KLPENPSGAS
301: RFASEARQLK RSRSFETLNL SWNDIKEEID NRSSSSSEAE EAAKIMHDDS SDGDSSSQDE EDGDKIRNSY GLPEDLVEEC RKVKDSQKYV RIVSKQMVGI
401: YVSVWIRRRL RRHVNNLKVS PVGVGLMGYM GNKGSVSISM TLYQSRMCFV CSHLTSGHKD GAEQRRNADV YEIIRRTRFA SVLDTDQPRT IPCHDQVFWF
501: GDLNYRLNMS DGEVRKLVSQ KRWDELKNSD QLIRELRRGH VFDGWREGPI KFPPTYKYEF DSDRYAGENL REPEKKRAPA WCDRILWLGK GIRQECYKRS
601: EIRMSDHRPV TSIFNVGVEV FDHRKLQRAL HVNNAAASAV HPEPSF

Arabidopsis Description

IP5P2Type I inositol polyphosphate 5-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.