CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96338	Canola	plastid	97.65	95.55
CDY53817	Canola	nucleus	42.54	83.13
AT1G71710.1	Thale cress	cytosol, nucleus, plastid	84.46	81.02
CDY53820	Canola	mitochondrion	36.89	80.76
CDY53816	Canola	cytosol	30.14	79.34
CDX68304	Canola	cytosol, nucleus, plastid	79.12	79.25
CDY37949	Canola	cytosol, nucleus, plastid	76.3	78.64
CDY03700	Canola	cytosol, nucleus, plastid	78.96	77.86
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	54.32	54.83
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	53.85	54.36
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	53.69	53.52
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	53.53	53.2
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	41.92	51.35
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	53.69	51.27
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	43.17	50.46
CDY05076	Canola	mitochondrion	45.53	50.43
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	42.54	50.37
CDX90734	Canola	mitochondrion	45.37	49.83
GSMUA_AchrUn_...	Banana	nucleus	45.21	49.66
VIT_18s0157g00210.t01	Wine grape	plastid	55.26	49.65
KXG22413	Sorghum	peroxisome	33.75	48.64
Zm00001d038831_P001	Maize	mitochondrion, nucleus	31.08	48.06
GSMUA_Achr7P13350_001	Banana	mitochondrion	41.13	47.81
Os01t0183300-01	Rice	cytosol	45.05	46.97
CDY70508	Canola	cytosol	24.8	46.88
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	46.47	46.25
TraesCS3A01G114900.1	Wheat	cytosol	41.92	45.49
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	41.44	45.28
EES01371	Sorghum	plastid	44.58	43.63
KXG22411	Sorghum	mitochondrion	40.82	43.55
GSMUA_Achr10P...	Banana	cytosol	45.53	43.28
TraesCS3B01G275500.1	Wheat	cytosol	45.21	42.92
Os01t0716800-01	Rice	plastid	45.53	42.9
TraesCS3D01G246900.1	Wheat	cytosol	45.21	42.79
TraesCS3A01G244500.1	Wheat	cytosol	44.9	42.56
HORVU3Hr1G020880.11	Barley	cytosol	42.07	42.41
TraesCS3D01G117300.2	Wheat	mitochondrion	42.07	41.61
Zm00001d039582_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	44.9	41.39
HORVU3Hr1G067840.2	Barley	cytosol	45.68	40.76
Zm00001d038830_P002	Maize	plastid	37.36	40.68
CDY15795	Canola	mitochondrion	27.32	40.56
TraesCS1A01G357300.2	Wheat	cytosol	40.19	40.38
TraesCS1D01G361500.2	Wheat	cytosol	39.87	40.19
Zm00001d043653_P004	Maize	plastid	44.9	40.11
CDY09402	Canola	mitochondrion	27.0	40.09
TraesCS1B01G373800.3	Wheat	cytosol	41.92	39.85
CDX79733	Canola	nucleus	27.47	39.77
CDX91363	Canola	mitochondrion	29.83	39.75
CDY15360	Canola	nucleus	33.75	38.53
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	41.13	38.42
CDY15542	Canola	nucleus	32.65	37.96
CDX78819	Canola	nucleus	21.19	37.5
CDX74960	Canola	mitochondrion	29.36	37.47
CDY18445	Canola	mitochondrion	29.04	37.3
CDY10113	Canola	nucleus	32.65	37.28
CDY07789	Canola	mitochondrion	27.0	37.23
CDY47282	Canola	nucleus	32.65	37.21
CDX76691	Canola	cytosol, mitochondrion, nucleus	32.65	37.08
CDX86576	Canola	nucleus	32.65	37.08
CDY56450	Canola	mitochondrion	32.65	37.01
Os05t0535600-00	Rice	cytosol, mitochondrion	21.19	36.89
CDY60962	Canola	cytosol, golgi, nucleus	33.59	36.83
CDX93379	Canola	mitochondrion	28.57	36.69
CDX80935	Canola	nucleus	26.22	35.38
CDY44496	Canola	nucleus	34.69	35.36
CDY14134	Canola	plastid	26.06	35.1
CDX90428	Canola	nucleus	35.16	35.0
CDY04934	Canola	nucleus	25.9	34.88
CDY33984	Canola	nucleus	25.75	34.67
KRH04678	Soybean	cytosol	17.9	33.43
CDY68359	Canola	nucleus	27.16	32.64
CDY31285	Canola	nucleus	26.22	30.25
CDY08822	Canola	nucleus	26.53	29.19
CDY14538	Canola	nucleus	26.53	29.14

Protein Annotations

EnsemblPlants:CDX72820	EnsemblPlantsGene:GSBRNA2T00103212001	Gene3D:3.60.10.10	GO:A0A078C7N0	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF128	PFAM:PF03372	ProteinID:CDX72820	ProteinID:CDX72820.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EE5D58	MapMan:27.5.4.1	:

Description

BnaC06g32680D

Coordinates

chrLK031797:-:453003..456196

Molecular Weight (calculated)

71986.2 Da

IEP (calculated)

6.225

GRAVY (calculated)

-0.526

Length

637 amino acids

Sequence
(BLAST)

001: MMSSSSVAEP AGMIKKSYRR QKSQRLWAKL VMRKWLNISA KDPEYGADTE DESENDDFGE RNQDSSSSDE DCEESSTQRK EPVQPRVCEN AEDAIAAAFA
101: TVDAAAAAAE FINNDAPMKL RRRNSETLRA HYIYNKEISR VCVGTWNVGG ISPPSDLDID DWIEINQPAD IYVLGLQEIV PLNAGNILGA EDNRPVTKWE
201: EVIRESLNRV RPKNSGFKSY SDPPSPGRFK PFEETHDVIE GEVAYETDSD AGVEIHPIDE EEEGSLRVLK HDGGVIGEVN TFVDPSSGLP VVEINTQFSS
301: TKKLDRQDDA SEPGLKTLHR MLSGKERIGL SWPEPPLNML GPSCSLRTAN SFKAYSSFKS VLALAEMDLK LLMERKRRPA YVRLVSKQMV GILLTIWVKR
401: SLRKHIQNVR VSTVGVGIMG YIGNKGAVSV SMSINQTFFC FICTHLTAGE REVDQIKRNA DVHEIHKRTI FHSVSALGLP KLIYDHERII WLGDLNYRLN
501: LSYEKARDLI SKKEWSHLLE YDQLVKEYKK GRAFDGWSEG TLHFPPTYKY QAHSDEYTCG DGKGARRTPA WCDRVLSYGN GMKLVHYRRT EQNFSDHRPV
601: TAIYMAEVEV FSVRKLQQAL TLTDREIEDE KLVAIVA

Best Arabidopsis Sequence Match ( AT1G71710.1 )
(BLAST)

001: MSPVEPAGIM KKSHRQKSQR LWAKLVMRKW LNISGRDPEY GADTDNESEN EDAREDNDDS SSDEEGGSGS RGRESKVYEN AEDAIAAASA VVDAAAAAAE
101: FISNDAPMKL RRRNSETLRA QYINNKEIRV CVGTWNVGGI SPPSDLDIDD WIEINQPADI YVLGLQEIVP LNAGNILGAE DDRPVAKWEE VIREALNRVR
201: PKLSGVKSYS DPPSPGRFKP FEETHDIIEE EVAFESDSDA GVEIHPIDEE EEEETDRLWA LKHDGGVIGE VKTLVDPNTG LPVVEIKRQF SIPKKLDRQL
301: CLRADSFKGI SDDDSTQTGM KTINRMLSGK ERIGLSWPEP PLNMLGPCVL DRQPSIKTVK SLKTAKSFKA YSSFKSVAGN NNGIPPEVLA LAEMDLKLLM
401: ERKRRPAYVR LVSKQMVGIL LTIWVKRSLR KHIQNVRVST VGVGVMGYIG NKGAVSVSMS INQTFFCFIN THLTAGEREV DQIKRNADVH EIHKRTVFHS
501: VSALGLPKLI YDHERIIWLG DLNYRLSSSY EKTRDLISKR EWSKLLEYDQ LVKEYRKGRA FDGWSEGTLH FPPTYKYQAN SDEYTANDGK APKRTPAWCD
601: RVLSYGKGMR LVHYRRTEQK FSDHRPVTAI YMAEVEVFSA RKLQRALTFT DAEIEDEGLV AVLV

Arabidopsis Description

IP5P3Type IV inositol polyphosphate 5-phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Z6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.