Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15360 | Canola | nucleus | 93.98 | 97.85 |
| Bra021766.1-P | Field mustard | nucleus | 94.15 | 94.8 |
| AT2G32010.3 | Thale cress | nucleus | 87.44 | 85.52 |
| CDY15542 | Canola | nucleus | 80.55 | 85.4 |
| CDX86576 | Canola | nucleus | 81.58 | 84.49 |
| CDY47282 | Canola | nucleus | 80.72 | 83.9 |
| CDY10113 | Canola | nucleus | 80.38 | 83.69 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 71.94 | 73.72 |
| KRG91335 | Soybean | nucleus | 72.98 | 73.36 |
| KRH35494 | Soybean | nucleus | 72.98 | 72.23 |
| KRH77819 | Soybean | nucleus | 71.77 | 72.02 |
| KRH32792 | Soybean | cytosol | 32.7 | 71.7 |
| KRH27671 | Soybean | nucleus | 71.43 | 71.68 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 66.44 | 69.18 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 56.45 | 67.21 |
| KRH32041 | Soybean | nucleus | 64.2 | 66.73 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 56.8 | 66.67 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 54.22 | 66.46 |
| KRH71395 | Soybean | nucleus | 62.99 | 65.36 |
| KRG95566 | Soybean | nucleus | 62.65 | 65.12 |
| Solyc09g082370.2.1 | Tomato | nucleus | 69.88 | 65.06 |
| PGSC0003DMT400082071 | Potato | nucleus | 69.88 | 65.06 |
| KRH67243 | Soybean | nucleus | 62.31 | 64.99 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 47.85 | 64.5 |
| PGSC0003DMT400042059 | Potato | nucleus | 65.23 | 63.59 |
| Solyc09g065480.1.1 | Tomato | nucleus | 61.27 | 63.57 |
| PGSC0003DMT400049726 | Potato | nucleus | 61.1 | 63.39 |
| Solyc06g054010.2.1 | Tomato | nucleus | 63.68 | 62.39 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 56.8 | 62.38 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 54.91 | 62.06 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 53.7 | 61.66 |
| Os03t0793600-00 | Rice | nucleus | 59.9 | 61.59 |
| KXG37885 | Sorghum | nucleus | 58.35 | 60.97 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 53.01 | 60.87 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 60.59 | 60.79 |
| Os07t0175900-01 | Rice | cytosol | 59.55 | 60.7 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 52.84 | 60.67 |
| EER98050 | Sorghum | cytosol | 59.38 | 60.63 |
| EER93309 | Sorghum | nucleus | 58.69 | 60.46 |
| Zm00001d048434_P001 | Maize | mitochondrion | 60.41 | 60.41 |
| Zm00001d033451_P004 | Maize | nucleus | 58.0 | 60.29 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 58.52 | 60.28 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 58.35 | 60.11 |
| Os03t0160600-01 | Rice | mitochondrion | 59.55 | 60.07 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 58.18 | 59.93 |
| Zm00001d013090_P002 | Maize | nucleus | 58.18 | 59.61 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 58.0 | 59.54 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 57.66 | 59.29 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 57.49 | 59.12 |
| Zm00001d013603_P006 | Maize | nucleus | 57.83 | 58.95 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 57.31 | 58.94 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 58.86 | 58.86 |
| CDY70508 | Canola | cytosol | 34.08 | 58.75 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 58.86 | 58.66 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 58.86 | 58.56 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 58.52 | 58.42 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 59.21 | 58.31 |
| CDY56450 | Canola | mitochondrion | 56.11 | 58.01 |
| Zm00001d034410_P001 | Maize | plastid | 57.49 | 57.79 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 55.77 | 57.75 |
| Zm00001d018929_P002 | Maize | cytosol | 59.38 | 57.12 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 56.11 | 56.79 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 58.0 | 56.26 |
| EER91601 | Sorghum | nucleus | 56.63 | 55.95 |
| Zm00001d032935_P006 | Maize | nucleus | 56.28 | 55.33 |
| CDX91363 | Canola | mitochondrion | 40.45 | 49.16 |
| CDX79733 | Canola | nucleus | 37.18 | 49.09 |
| CDY18445 | Canola | mitochondrion | 40.79 | 47.78 |
| CDX74960 | Canola | mitochondrion | 40.79 | 47.49 |
| CDX93379 | Canola | mitochondrion | 40.28 | 47.18 |
| CDY07789 | Canola | mitochondrion | 37.18 | 46.75 |
| Os03t0663700-01 | Rice | nucleus | 23.41 | 46.74 |
| CDY04934 | Canola | nucleus | 37.87 | 46.51 |
| CDY14134 | Canola | plastid | 37.87 | 46.51 |
| CDX80935 | Canola | nucleus | 37.18 | 45.76 |
| CDY33984 | Canola | nucleus | 36.14 | 44.4 |
| CDY53817 | Canola | nucleus | 24.44 | 43.56 |
| CDY15795 | Canola | mitochondrion | 31.67 | 42.89 |
| CDY09402 | Canola | mitochondrion | 31.33 | 42.42 |
| CDX78819 | Canola | nucleus | 24.96 | 40.28 |
| CDY53820 | Canola | mitochondrion | 19.97 | 39.86 |
| CDY31285 | Canola | nucleus | 37.35 | 39.31 |
| CDY14538 | Canola | nucleus | 38.38 | 38.45 |
| CDY08822 | Canola | nucleus | 38.21 | 38.34 |
| CDY28392 | Canola | cytosol, golgi, mitochondrion, plastid | 35.63 | 37.98 |
| CDX73292 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 35.11 | 37.92 |
| CDY05076 | Canola | mitochondrion | 34.6 | 34.96 |
| CDX90734 | Canola | mitochondrion | 34.77 | 34.83 |
| CDX72820 | Canola | cytosol, nucleus, plastid | 36.83 | 33.59 |
| CDY44496 | Canola | nucleus | 35.97 | 33.44 |
| CDX68304 | Canola | cytosol, nucleus, plastid | 36.49 | 33.33 |
| CDX96338 | Canola | plastid | 37.01 | 33.03 |
| CDX90428 | Canola | nucleus | 36.32 | 32.97 |
| CDY37949 | Canola | cytosol, nucleus, plastid | 32.7 | 30.74 |
| CDY03700 | Canola | cytosol, nucleus, plastid | 33.05 | 29.72 |
| CDY68359 | Canola | nucleus | 26.33 | 28.87 |
| CDY53816 | Canola | cytosol | 11.7 | 28.1 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | GO:A0A078JAL1 | UniProt:A0A078JAL1 | EnsemblPlants:CDY60962 | ProteinID:CDY60962 |
| ProteinID:CDY60962.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00030328001 |
| InterPro:IPPc | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF159 | SMART:SM00128 |
| SUPFAM:SSF56219 | UniParc:UPI0004EED3D9 | SEG:seg | : | : | : |
Description
BnaA04g28910DBnaA04g28910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAL1]
Coordinates
chrLK033937:-:17985..21611
Molecular Weight (calculated)
66907.1 Da
IEP (calculated)
9.634
GRAVY (calculated)
-0.669
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDDKSKKSK LSWSKKMVRK WFNIKSKTEE FQADVSLPQG VCLTAIFCLF LEQRNKQTFL LVLVVEVEHR SSISEKEPST IKKSKAEKLN KNWEQQARQR
101: RMNYENPRII DVQNYSIFVA TWNVAGRSPP EDLNLDEWLH SSAPADIYVL GFQEIVPLNA GNVLGAEDNG PAKKWHSLIR KTLNNLPGTS SLSHTPSPIP
201: VPIAEIDADF SGSSRQTFFN RRSFQTPSIW RTDENDSSAT QPPVERRLSV CDRVFFSHRP SDFDPSFRCS HRPSDYSRAS DYYSRPRDSP STGLYSPGSN
301: ENGSRISWNS SQYCLVASKQ MVGIFLTVWV KSELREHVKN MKVSCVGRGL MGYLGNKGSI SISMLLHQTS FCFVCTHLTS GQKEGDELRR NSDVMEILKK
401: TRFPRVQSSA GEKSPENILQ HDRVIWLGDL NYRIALSYRS AKALVEMQNW RALLENDQLR IEQKRGHVFK GWDEGKIYFP PTYKYSTNSD RYAGDDLHPK
501: EKRRTPAWCD RILWYGEGLH QLCYVRGESR FSDHRPVYGI FSAEVESNHK RLKRATSYST SRVQAEELLP YPRGYTELTF F
101: RMNYENPRII DVQNYSIFVA TWNVAGRSPP EDLNLDEWLH SSAPADIYVL GFQEIVPLNA GNVLGAEDNG PAKKWHSLIR KTLNNLPGTS SLSHTPSPIP
201: VPIAEIDADF SGSSRQTFFN RRSFQTPSIW RTDENDSSAT QPPVERRLSV CDRVFFSHRP SDFDPSFRCS HRPSDYSRAS DYYSRPRDSP STGLYSPGSN
301: ENGSRISWNS SQYCLVASKQ MVGIFLTVWV KSELREHVKN MKVSCVGRGL MGYLGNKGSI SISMLLHQTS FCFVCTHLTS GQKEGDELRR NSDVMEILKK
401: TRFPRVQSSA GEKSPENILQ HDRVIWLGDL NYRIALSYRS AKALVEMQNW RALLENDQLR IEQKRGHVFK GWDEGKIYFP PTYKYSTNSD RYAGDDLHPK
501: EKRRTPAWCD RILWYGEGLH QLCYVRGESR FSDHRPVYGI FSAEVESNHK RLKRATSYST SRVQAEELLP YPRGYTELTF F
001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
Arabidopsis Description
IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.