Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 82.01 | 83.33 |
| KRG91335 | Soybean | nucleus | 83.42 | 81.83 |
| KRH77819 | Soybean | nucleus | 83.42 | 81.69 |
| KRH32792 | Soybean | cytosol | 38.1 | 81.51 |
| KRH27671 | Soybean | nucleus | 82.89 | 81.17 |
| KRH35494 | Soybean | nucleus | 83.77 | 80.92 |
| CDY47282 | Canola | nucleus | 74.07 | 75.13 |
| CDY15542 | Canola | nucleus | 72.49 | 75.0 |
| CDY10113 | Canola | nucleus | 73.55 | 74.73 |
| CDY15360 | Canola | nucleus | 73.55 | 74.73 |
| AT2G32010.3 | Thale cress | nucleus | 78.13 | 74.58 |
| PGSC0003DMT400082071 | Potato | nucleus | 81.66 | 74.2 |
| Solyc09g082370.2.1 | Tomato | nucleus | 81.48 | 74.04 |
| CDX86576 | Canola | nucleus | 73.02 | 73.8 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 63.49 | 73.77 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 64.37 | 73.74 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 61.55 | 73.63 |
| Bra021766.1-P | Field mustard | nucleus | 74.78 | 73.48 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 54.85 | 72.16 |
| Bra015428.1-P | Field mustard | nucleus | 74.07 | 72.04 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 73.72 | 71.94 |
| PGSC0003DMT400042059 | Potato | nucleus | 75.48 | 71.81 |
| AT1G05470.2 | Thale cress | nucleus | 77.95 | 71.64 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 62.61 | 70.16 |
| Solyc06g054010.2.1 | Tomato | nucleus | 73.19 | 69.98 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 62.26 | 69.76 |
| Os03t0160600-01 | Rice | mitochondrion | 70.37 | 69.27 |
| Bra030611.1-P | Field mustard | nucleus | 76.01 | 69.07 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 64.2 | 68.81 |
| EER93309 | Sorghum | nucleus | 68.25 | 68.62 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 70.02 | 68.57 |
| Zm00001d048434_P001 | Maize | mitochondrion | 70.19 | 68.5 |
| Os07t0175900-01 | Rice | cytosol | 68.78 | 68.42 |
| Os03t0793600-00 | Rice | nucleus | 68.08 | 68.32 |
| AT3G63240.2 | Thale cress | nucleus | 65.78 | 68.19 |
| Zm00001d013090_P002 | Maize | nucleus | 67.72 | 67.72 |
| EER98050 | Sorghum | cytosol | 67.72 | 67.49 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 67.2 | 67.43 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 67.02 | 67.26 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 66.67 | 66.9 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 69.31 | 66.61 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 68.25 | 66.61 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 59.44 | 66.6 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 68.43 | 66.55 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 68.25 | 66.27 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 67.72 | 65.98 |
| Zm00001d034410_P001 | Maize | plastid | 67.2 | 65.92 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 66.67 | 65.85 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 59.44 | 65.56 |
| KXG37885 | Sorghum | nucleus | 63.84 | 65.11 |
| EER91601 | Sorghum | nucleus | 67.37 | 64.97 |
| Zm00001d033451_P004 | Maize | nucleus | 64.02 | 64.94 |
| CDY56450 | Canola | mitochondrion | 64.02 | 64.59 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 64.2 | 64.54 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 63.84 | 64.53 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 64.02 | 64.36 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 67.72 | 64.11 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 63.67 | 64.01 |
| Bra007737.1-P | Field mustard | mitochondrion | 64.55 | 63.99 |
| Zm00001d032935_P006 | Maize | nucleus | 66.49 | 63.79 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 63.49 | 63.6 |
| Zm00001d013603_P006 | Maize | nucleus | 62.79 | 62.46 |
| Zm00001d018929_P002 | Maize | cytosol | 65.43 | 61.42 |
| Os03t0663700-01 | Rice | nucleus | 27.34 | 53.26 |
| VIT_13s0073g00680.t01 | Wine grape | cytosol | 37.39 | 49.19 |
| VIT_08s0040g02520.t01 | Wine grape | cytosol | 40.04 | 46.9 |
| VIT_00s0556g00010.t01 | Wine grape | golgi, vacuole | 35.63 | 45.39 |
| VIT_01s0011g06310.t01 | Wine grape | mitochondrion | 34.22 | 44.19 |
| VIT_14s0066g02270.t01 | Wine grape | cytosol | 36.33 | 42.56 |
| VIT_00s0357g00110.t01 | Wine grape | golgi | 34.74 | 42.27 |
| VIT_02s0012g00550.t01 | Wine grape | mitochondrion | 38.98 | 35.19 |
| VIT_18s0157g00210.t01 | Wine grape | plastid | 40.92 | 32.72 |
Protein Annotations
| EntrezGene:100242545 | wikigene:100242545 | MapMan:27.5.4.1 | Gene3D:3.60.10.10 | ProteinID:CCB50441 | ProteinID:CCB50441.1 |
| InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | UniProt:F6HDS0 | EMBL:FN595749 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 |
| InterPro:IPPc | InterPro:IPR036691 | EntrezGene:LOC100242545 | wikigene:LOC100242545 | PFAM:PF03372 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF159 | SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI000198326C | ArrayExpress:VIT_05s0020g03770 | EnsemblPlantsGene:VIT_05s0020g03770 |
| EnsemblPlants:VIT_05s0020g03770.t01 | unigene:Vvi.23102 | unigene:Vvi.25683 | RefSeq:XP_002282939 | RefSeq:XP_002282939.1 | RefSeq:XP_010649932.1 |
| RefSeq:XP_019075258.1 | RefSeq:XP_019075259.1 | RefSeq:XP_019075260.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5:-:5463585..5468872
Molecular Weight (calculated)
64844.1 Da
IEP (calculated)
8.747
GRAVY (calculated)
-0.683
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDGSSKKSK LSWSKTLVRK WFNIKSKTEE FQADEVVCGG GDVEWRTSFS EREPCTIKKS KTEKISKSAE RVRQSRIDLD HPRVIDVQNY SIFVTTWNVG
101: GKSPPSNLNL DDWLHASPPA DIYVLGFQEI VPLNAGNVLG AEDNGPARKW LSLIRNTLNN LPGTSGSGGC YTPSPIPEPI VELDADFEGS ARQKASSFFH
201: RRSFQTTRSW RMDNDPSMTQ PRLDRRFSVC DRVIFGHRPS DFDPNFRWGH RPSDYSRWGS SDDDNGPGDS PSTVLFSPIS CGGSAPVEEG YRMPGNSRYC
301: LVASKQMVGI FLTVWVRSEL RDYVRNMKVS CVGRGLMGYL GNKGSISISM SLHQTSFCFV CSHLTSGQKE GDELRRNSDV MEILRKTRFP RVNDTGDEKS
401: PETILEHDRI IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQR RGRVFEGWNE GKIYFPPTYK YSNNSDRYSG DDMHPKEKRR TPAWCDRILW
501: YGGGLHQLSY VRGESRFSDH RPVYSIFWAE VESINSRLKK STSYSSSRID VEDFLPYSHG YTELSFF
101: GKSPPSNLNL DDWLHASPPA DIYVLGFQEI VPLNAGNVLG AEDNGPARKW LSLIRNTLNN LPGTSGSGGC YTPSPIPEPI VELDADFEGS ARQKASSFFH
201: RRSFQTTRSW RMDNDPSMTQ PRLDRRFSVC DRVIFGHRPS DFDPNFRWGH RPSDYSRWGS SDDDNGPGDS PSTVLFSPIS CGGSAPVEEG YRMPGNSRYC
301: LVASKQMVGI FLTVWVRSEL RDYVRNMKVS CVGRGLMGYL GNKGSISISM SLHQTSFCFV CSHLTSGQKE GDELRRNSDV MEILRKTRFP RVNDTGDEKS
401: PETILEHDRI IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQR RGRVFEGWNE GKIYFPPTYK YSNNSDRYSG DDMHPKEKRR TPAWCDRILW
501: YGGGLHQLSY VRGESRFSDH RPVYSIFWAE VESINSRLKK STSYSSSRID VEDFLPYSHG YTELSFF
001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
Arabidopsis Description
IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.