Factsheet for Solyc09g082370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082071	Potato	nucleus	99.2	99.2
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	74.04	81.48
Solyc06g054010.2.1	Tomato	nucleus	75.8	79.76
KRH32792	Soybean	cytosol	33.81	79.62
KRH77819	Soybean	nucleus	72.92	78.58
KRH27671	Soybean	nucleus	72.6	78.24
KRH35494	Soybean	nucleus	72.6	77.17
KRG91335	Soybean	nucleus	71.47	77.16
AT2G32010.3	Thale cress	nucleus	70.51	74.07
CDY15360	Canola	nucleus	65.38	73.12
CDY15542	Canola	nucleus	63.94	72.81
Bra021766.1-P	Field mustard	nucleus	67.31	72.79
AT1G05470.2	Thale cress	nucleus	71.15	71.96
CDX86576	Canola	nucleus	64.42	71.66
Bra015428.1-P	Field mustard	nucleus	66.83	71.53
CDY47282	Canola	nucleus	63.62	71.02
CDY10113	Canola	nucleus	63.3	70.79
CDY60962	Canola	cytosol, golgi, nucleus	65.06	69.88
Bra030611.1-P	Field mustard	nucleus	69.71	69.71
GSMUA_Achr7P01420_001	Banana	nucleus	55.29	69.7
Solyc09g065480.1.1	Tomato	nucleus	61.86	68.93
GSMUA_Achr4P21240_001	Banana	cytosol	52.24	68.78
GSMUA_Achr2P08860_001	Banana	cytosol	47.44	68.68
GSMUA_Achr5P02940_001	Banana	nucleus	52.88	67.62
Os03t0793600-00	Rice	nucleus	59.78	66.02
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	53.37	65.81
Zm00001d048434_P001	Maize	mitochondrion	60.74	65.23
EER93309	Sorghum	nucleus	58.81	65.07
EER92819	Sorghum	cytosol, mitochondrion, nucleus	60.26	64.94
Os03t0160600-01	Rice	mitochondrion	59.94	64.93
GSMUA_Achr3P14960_001	Banana	nucleus	54.97	64.84
GSMUA_Achr7P25790_001	Banana	nucleus	52.4	64.62
GSMUA_Achr7P07740_001	Banana	cytosol	52.4	64.62
GSMUA_Achr2P17460_001	Banana	nucleus	53.04	64.4
Os07t0175900-01	Rice	cytosol	58.81	64.39
Zm00001d013090_P002	Maize	nucleus	58.49	64.37
AT3G63240.2	Thale cress	nucleus	56.25	64.17
TraesCS4D01G015900.2	Wheat	nucleus	57.85	64.01
TraesCS4A01G296200.1	Wheat	nucleus	57.85	64.01
EER98050	Sorghum	cytosol	58.33	63.97
TraesCS5D01G439900.1	Wheat	nucleus	57.69	63.72
TraesCS5A01G432000.1	Wheat	nucleus	57.69	63.72
KXG37885	Sorghum	nucleus	56.73	63.67
TraesCS4B01G017400.1	Wheat	nucleus	57.53	63.65
TraesCS5B01G434000.1	Wheat	nucleus	57.37	63.36
Os10t0422500-01	Rice	cytosol, mitochondrion, nucleus	59.78	63.22
TraesCS4D01G275200.1	Wheat	nucleus	58.81	63.17
Zm00001d033451_P004	Maize	nucleus	56.41	62.97
HORVU4Hr1G073350.1	Barley	cytosol, mitochondrion, nucleus	58.65	62.89
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	58.65	62.67
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	58.49	62.61
HORVU4Hr1G002820.15	Barley	nucleus	56.73	62.54
Zm00001d034410_P001	Maize	plastid	57.85	62.46
Zm00001d013603_P006	Maize	nucleus	57.05	62.46
TraesCS6A01G225700.2	Wheat	nucleus	57.05	62.02
EER91601	Sorghum	nucleus	57.21	60.71
CDY56450	Canola	mitochondrion	54.49	60.5
HORVU5Hr1G104620.10	Barley	nucleus	58.01	60.43
CDX76691	Canola	cytosol, mitochondrion, nucleus	54.33	60.43
Bra007737.1-P	Field mustard	mitochondrion	55.13	60.14
Zm00001d018929_P002	Maize	cytosol	57.53	59.44
Zm00001d032935_P006	Maize	nucleus	56.09	59.22
Os03t0663700-01	Rice	nucleus	24.84	53.26
Solyc06g072390.2.1	Tomato	cytosol	7.69	49.48
Solyc09g005690.2.1	Tomato	cytosol	33.33	49.17
Solyc01g005090.2.1	Tomato	nucleus	26.92	48.14
Solyc03g098030.2.1	Tomato	cytosol	27.56	44.91
Solyc02g087430.2.1	Tomato	mitochondrion, nucleus	29.81	40.7
Solyc04g054830.2.1	Tomato	nucleus	36.22	40.5
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	17.79	35.13
Solyc08g077210.2.1	Tomato	mitochondrion	33.65	33.33
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	32.37	32.63

Protein Annotations

EnsemblPlants:Solyc09g082370.2.1	EnsemblPlantsGene:Solyc09g082370.2	Gene3D:3.60.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf
InterPro:IPPc	InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF159	SEG:seg	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI000276C144	UniProt:K4CVL4	MapMan:27.5.4.1	:	:

Description

No Description!

Coordinates

chr9:-:68112724..68116655

Molecular Weight (calculated)

71193.1 Da

IEP (calculated)

9.321

GRAVY (calculated)

-0.839

Length

624 amino acids

Sequence
(BLAST)

001: MRDENSKKSK LSWSKKLVRK WFNIKGKTEE FQSDEVVYGG GDEWRTSISE REHCTIKKTK TEKSNSSRSM ERPRRGRADL DHPQIINVHN YSVFVATWNV
101: GGKSPSSNLS LDDWLHSAPP ADIYVLGFQE IVPLNAGNIL GAEDNGPAKK WLSLIRKTLN NGPGSSGGSS GCYTPSPVPD PIAEWNADFE GSGRRKASLF
201: PRRSFQTPQC WRMENDPSIS QPRLDRRYSV CDRVISGHRQ SDFDPNIRWG HRPSDYGPRP SDYSSGYRPS DYSSSHRPSD YSSGHRPSDY SSGHRPSDYS
301: SAHRPSDYSW GQRPSDFSRW GSSDDDYGPG DSPSTVLFSP VTGAEDGNRM PRNSRYCLVA SKQMVGIFLT VWVRSELREH VRNMKVSCVG RGLMGYLGNK
401: GSISVSMMLH QTSFCFVCTH LTSGQKEGDE LRRNADFMEI IKKTRFPRVS GADEEKSPEN ILEHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEKD
501: QLRIEQRQGR VFVGWKEGKI YFPPTYKYSR NSDRYAGDDM HPKEKRRTPA WCDRILWHGG GLQQLSYVRG ESRFSDHRPV SSVFWAEVES VPSRLRKSMS
601: CSSSRIEVEE LLPYSHGYTE LCFF

Best Arabidopsis Sequence Match ( AT1G05470.2 )
(BLAST)

001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF

Arabidopsis Description

IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.