Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60962 | Canola | cytosol, golgi, nucleus | 97.85 | 93.98 |
| AT2G32010.3 | Thale cress | nucleus | 91.58 | 86.03 |
| CDY15542 | Canola | nucleus | 84.23 | 85.77 |
| CDX86576 | Canola | nucleus | 85.3 | 84.85 |
| CDY47282 | Canola | nucleus | 83.33 | 83.18 |
| CDY10113 | Canola | nucleus | 83.15 | 83.15 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 74.73 | 73.55 |
| KRG91335 | Soybean | nucleus | 75.27 | 72.66 |
| KRH35494 | Soybean | nucleus | 75.63 | 71.89 |
| KRH77819 | Soybean | nucleus | 74.37 | 71.68 |
| KRH27671 | Soybean | nucleus | 74.01 | 71.33 |
| KRH32792 | Soybean | cytosol | 33.33 | 70.19 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 69.0 | 69.0 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 58.78 | 67.21 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 59.5 | 67.07 |
| KRH32041 | Soybean | nucleus | 66.85 | 66.73 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 56.45 | 66.46 |
| Solyc09g082370.2.1 | Tomato | nucleus | 73.12 | 65.38 |
| PGSC0003DMT400082071 | Potato | nucleus | 73.12 | 65.38 |
| KRH71395 | Soybean | nucleus | 65.59 | 65.36 |
| KRG95566 | Soybean | nucleus | 65.05 | 64.94 |
| KRH67243 | Soybean | nucleus | 64.7 | 64.81 |
| PGSC0003DMT400042059 | Potato | nucleus | 68.28 | 63.93 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 49.28 | 63.81 |
| Solyc09g065480.1.1 | Tomato | nucleus | 63.44 | 63.21 |
| PGSC0003DMT400049726 | Potato | nucleus | 63.26 | 63.04 |
| Solyc06g054010.2.1 | Tomato | nucleus | 66.67 | 62.73 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 57.53 | 62.45 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 58.96 | 62.19 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 56.09 | 61.86 |
| Os03t0793600-00 | Rice | nucleus | 62.01 | 61.24 |
| EER98050 | Sorghum | cytosol | 62.01 | 60.81 |
| Os07t0175900-01 | Rice | cytosol | 62.01 | 60.7 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 54.84 | 60.47 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 54.84 | 60.47 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 62.72 | 60.45 |
| EER93309 | Sorghum | nucleus | 60.93 | 60.28 |
| KXG37885 | Sorghum | nucleus | 60.04 | 60.25 |
| Zm00001d048434_P001 | Maize | mitochondrion | 62.54 | 60.07 |
| Os03t0160600-01 | Rice | mitochondrion | 61.83 | 59.9 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 60.39 | 59.75 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 60.22 | 59.57 |
| Zm00001d033451_P004 | Maize | nucleus | 59.68 | 59.57 |
| Zm00001d013090_P002 | Maize | nucleus | 60.39 | 59.44 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 60.04 | 59.4 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 59.86 | 59.01 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 59.68 | 58.94 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 59.5 | 58.76 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 59.5 | 58.76 |
| CDY70508 | Canola | cytosol | 35.3 | 58.46 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 60.75 | 58.35 |
| Zm00001d013603_P006 | Maize | nucleus | 59.5 | 58.25 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 61.47 | 58.14 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 60.57 | 57.98 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 60.57 | 57.88 |
| CDY56450 | Canola | mitochondrion | 58.24 | 57.83 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 60.22 | 57.73 |
| Zm00001d034410_P001 | Maize | plastid | 59.68 | 57.61 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 57.89 | 57.58 |
| Zm00001d018929_P002 | Maize | cytosol | 62.01 | 57.28 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 58.06 | 56.45 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 60.04 | 55.93 |
| EER91601 | Sorghum | nucleus | 58.78 | 55.78 |
| Zm00001d032935_P006 | Maize | nucleus | 58.42 | 55.16 |
| CDX91363 | Canola | mitochondrion | 41.94 | 48.95 |
| CDX79733 | Canola | nucleus | 38.53 | 48.86 |
| CDY18445 | Canola | mitochondrion | 42.29 | 47.58 |
| CDX74960 | Canola | mitochondrion | 42.29 | 47.29 |
| CDX93379 | Canola | mitochondrion | 41.76 | 46.98 |
| CDY07789 | Canola | mitochondrion | 38.53 | 46.54 |
| CDY04934 | Canola | nucleus | 39.07 | 46.09 |
| CDY14134 | Canola | plastid | 39.07 | 46.09 |
| Os03t0663700-01 | Rice | nucleus | 23.66 | 45.36 |
| CDX80935 | Canola | nucleus | 38.35 | 45.34 |
| CDY33984 | Canola | nucleus | 37.63 | 44.4 |
| CDY53817 | Canola | nucleus | 25.45 | 43.56 |
| CDY15795 | Canola | mitochondrion | 32.8 | 42.66 |
| CDY09402 | Canola | mitochondrion | 32.44 | 42.19 |
| CDY53820 | Canola | mitochondrion | 20.97 | 40.21 |
| CDX78819 | Canola | nucleus | 25.63 | 39.72 |
| CDY31285 | Canola | nucleus | 38.89 | 39.31 |
| CDY14538 | Canola | nucleus | 39.78 | 38.28 |
| CDY08822 | Canola | nucleus | 39.61 | 38.17 |
| CDX73292 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.74 | 38.1 |
| CDY28392 | Canola | cytosol, golgi, mitochondrion, plastid | 37.1 | 37.98 |
| CDY05076 | Canola | mitochondrion | 36.02 | 34.96 |
| CDX90734 | Canola | mitochondrion | 36.2 | 34.83 |
| CDX72820 | Canola | cytosol, nucleus, plastid | 38.53 | 33.75 |
| CDY44496 | Canola | nucleus | 37.46 | 33.44 |
| CDX68304 | Canola | cytosol, nucleus, plastid | 37.99 | 33.33 |
| CDX96338 | Canola | plastid | 38.71 | 33.18 |
| CDX90428 | Canola | nucleus | 37.81 | 32.97 |
| CDY37949 | Canola | cytosol, nucleus, plastid | 34.23 | 30.91 |
| CDY03700 | Canola | cytosol, nucleus, plastid | 34.41 | 29.72 |
| CDY68359 | Canola | nucleus | 27.42 | 28.87 |
| CDY53816 | Canola | cytosol | 12.19 | 28.1 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | GO:A0A078FLP8 | UniProt:A0A078FLP8 | EnsemblPlants:CDY15360 | ProteinID:CDY15360 |
| ProteinID:CDY15360.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00085650001 |
| InterPro:IPPc | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF159 | SMART:SM00128 |
| SUPFAM:SSF56219 | UniParc:UPI0004EDCC0C | SEG:seg | : | : | : |
Description
BnaC04g42630DBnaC04g42630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLP8]
Coordinates
chrLK032054:-:262162..265358
Molecular Weight (calculated)
64392.8 Da
IEP (calculated)
9.659
GRAVY (calculated)
-0.753
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDDKSKKSK LSWSKKMVRK WFNIKSKTEE FQADVSLPQV VEVEHRSSIS EKEPSTIKKS KAEKLNKNWE QQARQRRMNY ENPRIIDVQN YSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGTSGVSH TPSPIPVPIA EIDADFSGSS RQTFFNRRSF
201: QTPSIWRTDE NDSSATQPPL ERRLSVCDRV FFSHRPSDFD PSFRCSHRPS DYSRPSDYYS RPSDYYSRAS LYSPGSNENG SRISWNSSQY CLVASKQMVG
301: IFLTVWVKSE LREHVKNMKV SCVGRGLMGY LGNKGSISIS MLLHQTSFCF VCTHLTSGQK EGDELRRNSD VMEILKKTRF PRVQSSAGEK SPENILQHDR
401: VIWLGDLNYR IALSYRSAKA LVEMQNWRAL LENDQLRIEQ KRGHVFKGWD EGKIYFPPTY KYSNNSDRYA GDDLHPKEKR RTPAWCDRIL WYGEGLHQLC
501: YVRGESRFSD HRPVYGIFSA EVESNHKRLK RATSYSTSRV QAEELLPYPR GYTELTFF
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGTSGVSH TPSPIPVPIA EIDADFSGSS RQTFFNRRSF
201: QTPSIWRTDE NDSSATQPPL ERRLSVCDRV FFSHRPSDFD PSFRCSHRPS DYSRPSDYYS RPSDYYSRAS LYSPGSNENG SRISWNSSQY CLVASKQMVG
301: IFLTVWVKSE LREHVKNMKV SCVGRGLMGY LGNKGSISIS MLLHQTSFCF VCTHLTSGQK EGDELRRNSD VMEILKKTRF PRVQSSAGEK SPENILQHDR
401: VIWLGDLNYR IALSYRSAKA LVEMQNWRAL LENDQLRIEQ KRGHVFKGWD EGKIYFPPTY KYSNNSDRYA GDDLHPKEKR RTPAWCDRIL WYGEGLHQLC
501: YVRGESRFSD HRPVYGIFSA EVESNHKRLK RATSYSTSRV QAEELLPYPR GYTELTFF
001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
Arabidopsis Description
IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.